Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq4771 187 8e-45 seq43 95.1 4e-17 >seq4771 Length=1398 Score = 187 bits (206), Expect = 8e-45 Identities = 145/170 (85%), Gaps = 11/170 (6%) Strand=Plus/Minus Query 341 TTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGT----ACTATCA 396 || |||||||||||||||||||||||||| |||||||| ||| || || || ||| Sbjct 1319 TTTGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTA--AATGTGTCCACGATCT 1262 Query 397 AATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATT--GCTTATA 454 ||| ||| ||||||||||||||||||||||||| ||||||| || ||| || | || Sbjct 1261 AATGAACCATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTA---ATTCGGCATGTA 1205 Query 455 CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1204 CTGAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 1155 >seq43 Length=5430903 Score = 95.1 bits (104), Expect = 4e-17 Identities = 116/155 (75%), Gaps = 9/155 (6%) Strand=Plus/Plus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTA-----CTATCAAA 398 || ||||| ||||||| |||||| || |||||||| |||| | | | ||| | || Sbjct 1160770 GCCTGTATGAGCTCTATAATTACAACAGTTATCCAAGTAGGAGAGGAGCGAGCTACCCAA 1160829 Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA-TAG-ATTGCTTATACT 456 | | ||||||||||||||||||||| |||||||| ||| | || ||| |||| Sbjct 1160830 GGAGCCGTAACTGATTTAATGAGCCATTGGCAGTTTCTCTGGACCAGCCGTGC--GTACT 1160887 Query 457 TAGACATGCATGGCTTAATCTTTGAGACAAGCATA 491 || | || |||||||||||||||||| |||||| Sbjct 1160888 GAGGCCTGTGTGGCTTAATCTTTGAGACCAGCATA 1160922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510285647616