Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq4771 187 8e-45
seq43 95.1 4e-17
>seq4771
Length=1398
Score = 187 bits (206), Expect = 8e-45
Identities = 145/170 (85%), Gaps = 11/170 (6%)
Strand=Plus/Minus
Query 341 TTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGT----ACTATCA 396
|| |||||||||||||||||||||||||| |||||||| ||| || || || |||
Sbjct 1319 TTTGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTA--AATGTGTCCACGATCT 1262
Query 397 AATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATT--GCTTATA 454
||| ||| ||||||||||||||||||||||||| ||||||| || ||| || | ||
Sbjct 1261 AATGAACCATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTA---ATTCGGCATGTA 1205
Query 455 CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1204 CTGAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 1155
>seq43
Length=5430903
Score = 95.1 bits (104), Expect = 4e-17
Identities = 116/155 (75%), Gaps = 9/155 (6%)
Strand=Plus/Plus
Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTA-----CTATCAAA 398
|| ||||| ||||||| |||||| || |||||||| |||| | | | ||| | ||
Sbjct 1160770 GCCTGTATGAGCTCTATAATTACAACAGTTATCCAAGTAGGAGAGGAGCGAGCTACCCAA 1160829
Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA-TAG-ATTGCTTATACT 456
| | ||||||||||||||||||||| |||||||| ||| | || ||| ||||
Sbjct 1160830 GGAGCCGTAACTGATTTAATGAGCCATTGGCAGTTTCTCTGGACCAGCCGTGC--GTACT 1160887
Query 457 TAGACATGCATGGCTTAATCTTTGAGACAAGCATA 491
|| | || |||||||||||||||||| ||||||
Sbjct 1160888 GAGGCCTGTGTGGCTTAATCTTTGAGACCAGCATA 1160922
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510285647616
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |