Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq927 233 2e-56 seq861 104 2e-17 seq636 96.9 3e-15 >seq927 Length=612318 Score = 233 bits (258), Expect = 2e-56 Identities = 585/874 (67%), Gaps = 20/874 (2%) Strand=Plus/Minus Query 61066 TTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGG 61125 || || ||||| || | |||||||||| ||||| || || ||||| |||||||| ||| Sbjct 154487 TTTCCTATCGAATACCATGATATTTGGCAGATGTATAAGAAAGCGGAGGCTTCCTTTTGG 154428 Query 61126 ACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGA-GCGTTTATCGAGC-- 61182 || | ||||| || ||| | ||||| ||| | | ||||||| || | | ||| Sbjct 154427 ACAGCTGAGGAAGTGGATCTCTCCAAGGACCTCCAGCACTGGGAAGCCCTGA---AGCCT 154371 Query 61183 GGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTC 61242 | ||| | |||| || ||||| | || |||||||| || || || || ||| Sbjct 154370 GATGAGAGATATTTTATATCCCATGTTCTTGCTTTCTTTGCTGCGAGTGATGGCATAGTC 154311 Query 61243 AATGAGAATTTATTGGAACG-TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTT 61301 ||||| || || |||| || ||| || || || | || | | || || || ||||| Sbjct 154310 AATGAAAACTTGGTGGAGCGGTTTAGC-CAAGAAATTCAGATTACAGAAGCCCGCTGTTT 154252 Query 61302 CTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGA 61361 ||| |||||||| ||||||||||| || || || |||||||| ||| | |||| || Sbjct 154251 CTATGGCTTCCAAATTGCCATGGA-AACAAACATTCTGAGATGTATAGTCTCCTCAATGA 154193 Query 61362 TACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACC 61421 ||||| || | || |||| | || | | ||||| ||||| ||||| || || Sbjct 154192 CACGTATATTAAAGATTCCAAGGAAAGGGAGTGTCTCTTCAACGCCATTGAGACAATGCC 154133 Query 61422 GGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAA--CGGCTACA 61479 || ||| ||| || ||||||||||| |||||| | |||| |||||| Sbjct 154132 TTGTGTCAAGAAGAAGGCAGATTGGGCCTTGCGTTGGAT--TGGGGACAAAGAGGCTACC 154075 Query 61480 TTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTT 61539 | ||| ||||| | | || ||||| | || || || | || || ||| || ||| Sbjct 154074 TATGGAGAACGTGTTGTAGCTTTTGCCGCAGTGGAAGGAATCTTCTTTTCTGGTTCTTTT 154015 Query 61540 GCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATG-A 61598 || | || || ||| | |||||| | ||||| ||| | || || || || ||| | | Sbjct 154014 GCATCGATATTCTGGCTCAAGAAATGAGGACTGATGTCTGGCCTCACATTTTCCAACGAA 153955 Query 61599 GTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTA 61658 || || || | || ||||| | || ||||| ||||| || | ||||||| | Sbjct 153954 CTTATTAGCA-GAGATGAGGGTTTACACTGTGACTTTGCCTGCCTGATGTTCAAAC---A 153899 Query 61659 TCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTAT 61718 ||| | | || |||||| || || || || || | || |||| || Sbjct 153898 CCTGATACACAAACCTTCGGAGCAGAAAGTCAAAGAAATAATTGTCAATGCTGTAAGGAT 153839 Query 61719 CGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACT 61778 |||||||| || || || || || ||||| || ||||| || |||||||| | Sbjct 153838 AGAACAGGAGTTCCTCACAGAGGCATTGCCGGTGAAGCTCATTGGGATGAATTGCACTTT 153779 Query 61779 AATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCG 61838 |||| ||||| ||||||||||| || ||| | || || | || ||||| | | Sbjct 153778 AATGAAGCAGTGCATTGAATTTGTGGCAGACAGACTTATGCTGGAGCTGGGTTTTAGCAA 153719 Query 61839 GATCTATAATACGA-AAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGA 61897 ||| | | | | | ||||||||||||| |||||||| | ||||| ||||| || |||| Sbjct 153718 GAT-TTTCAGAGTAGAAAACCCATTTGACTTCATGGAGAATATTTCACTGGAAGGGAAGA 153660 Query 61898 CGAATTTTTTCGAGAAACGTGTAGGCGACTATCA 61931 | || || || ||||| | ||||| || ||||| Sbjct 153659 CTAACTTCTTTGAGAAGAGAGTAGGAGAGTATCA 153626 >seq861 Length=819057 Score = 104 bits (114), Expect = 2e-17 Identities = 87/107 (81%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329 ||||||||||| || | ||||| || |||||||| ||||| || ||| ||| |||||| Sbjct 769263 CAGGAGGTGCAGGTTCCAGAGGCTCGCTGTTTCTATGGCTTTCAAATTCTCATCGAGAAT 769322 Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 |||||||| |||||||||||| | || || || |||||||| || || Sbjct 769323 GTCCACTCAGAGATGTACAGTTTGCTAATAGACACGTACATAAGAGA 769369 >seq636 Length=1077480 Score = 96.9 bits (106), Expect = 3e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 66050 GTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGA 66109 |||||||| || ||||| |||||||| || ||||| || || |||| ||||| || Sbjct 900621 GTATACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTTCCCAGGTTCTGCTGG 900562 Query 66110 TTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGG 66169 || || || || || || | ||| ||||| | |||||| || || || ||||| || Sbjct 900561 TTGCTTTTCCGGTTACAGGAATCTTTGTAGAGCATGTATGGGGTACCTGTCTCTGTCTGA 900502 Query 66170 GACTCAATGATGGCGTGCCAAAG 66192 |||||||||||||| | |||||| Sbjct 900501 GACTCAATGATGGCATACCAAAG 900479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397531315779440