Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq273 93.3 2e-13 seq562 87.8 7e-12 >seq273 Length=2275491 Score = 93.3 bits (102), Expect = 2e-13 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 349073 GCGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCG 349132 |||| || ||||| |||| | ||||| ||||||||| | |||| ||| || ||||| Sbjct 1531364 GCGTTGATGATCTCTTTGATCCGGGGCACGCCCAGGGTGATGTTCATGGAGGCCACGCCT 1531423 Query 349133 GCAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGG 349186 |||||||||||||||| ||||||| ||| ||| || ||||| |||| |||| Sbjct 1531424 GCAAAGTGGAAGGTCTTCAGGGTCATCTGGGTGCCTGGTTCGCCAATGCTCTGG 1531477 >seq562 Length=1347557 Score = 87.8 bits (96), Expect = 7e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 349094 CTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAAGGTCTGGAGG 349153 || || ||||||||||| |||||| | | | |||||||||||||||||| | ||| Sbjct 1250422 CTCGGAATGCCCAGGGTGACGTTCATCTCGCCTCTGCCGGCAAAGTGGAAGGTGTTCAGG 1250481 Query 349154 GTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTACCATCTCGCCG 349213 |||| ||| ||| |||||| ||||||| |||| | || || | ||| ||| ||| || Sbjct 1250482 GTCATCTGTGTGGAGGGCTCCCCGATGCTCTGGGCAGCCAGCAGGCCCACCGCCTCACCT 1250541 Query 349214 GGC 349216 ||| Sbjct 1250542 GGC 1250544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084532040768658