Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptonychotes_20weddellii_20[refseq_20GCF_5F000349705.1_202013-03- 29] 16,711 sequences; 3,156,902,762 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq1449 120 1e-24 seq876 105 3e-20 >seq1449 Length=686377 Score = 120 bits (132), Expect = 1e-24 Identities = 92/109 (84%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 575 GAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCG 634 |||||||||||||||||||||| |||| |||||||||||||||||||||||||| || Sbjct 132346 GAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGAGGTCCG 132405 Query 635 CAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || | | ||| |||||||||| ||||| | ||||||||||||||| Sbjct 132406 TAGTGTTCCTGATGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 132454 >seq876 Length=946617 Score = 105 bits (116), Expect = 3e-20 Identities = 94/118 (80%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625 || ||||| |||||| || ||| | |||||| || ||| |||||||||||||||||||| Sbjct 22666 TTAGGACCTGAAAGAGGGCGAATTGTGCCTGGGTAAGGTAAAGCCAGAGGAAACTCTGGT 22725 Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||| || ||| |||||| |||||||||| | ||| | || ||||||||| || Sbjct 22726 GGAGGTCCGTAGCAGTTCTGACGTGCAAATCTGTTGTCTGACCTGAGTATAGGGGTGA 22783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079641549050