Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptonychotes_20weddellii_20[refseq_20GCF_5F000349705.1_202013-03-
29] 16,711 sequences; 3,156,902,762 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq751 134 2e-29
seq609 118 2e-24
seq468 91.5 2e-16
seq90 73.4 6e-11
>seq751
Length=1050645
Score = 134 bits (148), Expect = 2e-29
Identities = 167/225 (74%), Gaps = 14/225 (6%)
Strand=Plus/Plus
Query 42 ACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATA 101
|||||||||||| |||| |||||||| ||| | || ||| | | ||| ||| |
Sbjct 1036812 ACATCTAAGGGCGTCACTTACCTGTTACTGC-TAAATCTTGGGTAG-CTGAGTACCACTT 1036869
Query 102 GTCCCTCTAAGAAGCCAGCCACCAACCATAGTCGATGGGG--------CTATTTAGCAGG 153
||||||| |||||| | | || || | | | |||| ||| ||||||||
Sbjct 1036870 GTCCCTCGAAGAAGTTGGAAAACA--CAGACTTG--GGGGTTGCGTAACTAGTTAGCAGG 1036925
Query 154 TTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGC 213
| ||||| ||| ||| ||||||||||||| | ||| |||||||| |||||||||||
Sbjct 1036926 CCAGAGTCTCATTCCTTACTGGAATTAACCAGATAGATCTCTCCACCAGCTAAGAACGGC 1036985
Query 214 CATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
||||| |||||||||| |||||||||||| |||||||| ||| ||
Sbjct 1036986 CATGCGCCACCACCCACAGAATCAAGAAAAAGCTATCACTCTATC 1037030
>seq609
Length=1192650
Score = 118 bits (130), Expect = 2e-24
Identities = 159/213 (75%), Gaps = 10/213 (5%)
Strand=Plus/Minus
Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76
||||||||||||||||| |||| | ||||||||||||||| |||||||||||||| |||
Sbjct 166287 CAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCGCAGACCTGTTATTGT-TCA 166229
Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCG- 135
| ||| | ||||| | || | | || | || ||| | || | | || |
Sbjct 166228 ATCTTGGGT-GGCTGCATGCTACTTGTAAAGTGAGGACGCC-GACAGCT-CTTGGGTTGC 166172
Query 136 ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACT 195
|| ||| |||||| | | ||||||||||||||||||||||||||||||||| ||
Sbjct 166171 ATAA--CTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATTGCT 166114
Query 196 CCACCAACTAAGAACGGCCATGCACCACCACCC 228
||||||||| ||| | ||||| ||||||||
Sbjct 166113 CCACCAACT---AACAGTGATGCAACACCACCC 166084
>seq468
Length=1654443
Score = 91.5 bits (100), Expect = 2e-16
Identities = 77/95 (81%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218
|||| |||| |||| |||||||||||| ||||| ||| ||| | ||||||| |||||||
Sbjct 1032330 GTCTTGTTCATTATAGGAATTAACCAGGCAAATTACTTCACTGAATAAGAACAGCCATGC 1032271
Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253
||||||| || |||||| |||||| || || ||
Sbjct 1032270 ACCACCATGCACAGAATCGGGAAAGAACTTTCCAT 1032236
>seq90
Length=2989883
Score = 73.4 bits (80), Expect = 6e-11
Identities = 49/54 (91%), Gaps = 2/54 (4%)
Strand=Plus/Plus
Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCT 255
|||||||| |||||||||| |||||| |||||||||||||||||||||||||
Sbjct 1294567 ACTAAGAAGAGCCATGCACC--CACCCACAGAATCAAGAAAGAGCTATCAATCT 1294618
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796671007791
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |