Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptonychotes_20weddellii_20[refseq_20GCF_5F000349705.1_202013-03- 29] 16,711 sequences; 3,156,902,762 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq751 134 2e-29 seq609 118 2e-24 seq468 91.5 2e-16 seq90 73.4 6e-11 >seq751 Length=1050645 Score = 134 bits (148), Expect = 2e-29 Identities = 167/225 (74%), Gaps = 14/225 (6%) Strand=Plus/Plus Query 42 ACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATA 101 |||||||||||| |||| |||||||| ||| | || ||| | | ||| ||| | Sbjct 1036812 ACATCTAAGGGCGTCACTTACCTGTTACTGC-TAAATCTTGGGTAG-CTGAGTACCACTT 1036869 Query 102 GTCCCTCTAAGAAGCCAGCCACCAACCATAGTCGATGGGG--------CTATTTAGCAGG 153 ||||||| |||||| | | || || | | | |||| ||| |||||||| Sbjct 1036870 GTCCCTCGAAGAAGTTGGAAAACA--CAGACTTG--GGGGTTGCGTAACTAGTTAGCAGG 1036925 Query 154 TTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGC 213 | ||||| ||| ||| ||||||||||||| | ||| |||||||| ||||||||||| Sbjct 1036926 CCAGAGTCTCATTCCTTACTGGAATTAACCAGATAGATCTCTCCACCAGCTAAGAACGGC 1036985 Query 214 CATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||| |||||||||| |||||||||||| |||||||| ||| || Sbjct 1036986 CATGCGCCACCACCCACAGAATCAAGAAAAAGCTATCACTCTATC 1037030 >seq609 Length=1192650 Score = 118 bits (130), Expect = 2e-24 Identities = 159/213 (75%), Gaps = 10/213 (5%) Strand=Plus/Minus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 ||||||||||||||||| |||| | ||||||||||||||| |||||||||||||| ||| Sbjct 166287 CAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCGCAGACCTGTTATTGT-TCA 166229 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCG- 135 | ||| | ||||| | || | | || | || ||| | || | | || | Sbjct 166228 ATCTTGGGT-GGCTGCATGCTACTTGTAAAGTGAGGACGCC-GACAGCT-CTTGGGTTGC 166172 Query 136 ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACT 195 || ||| |||||| | | ||||||||||||||||||||||||||||||||| || Sbjct 166171 ATAA--CTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATTGCT 166114 Query 196 CCACCAACTAAGAACGGCCATGCACCACCACCC 228 ||||||||| ||| | ||||| |||||||| Sbjct 166113 CCACCAACT---AACAGTGATGCAACACCACCC 166084 >seq468 Length=1654443 Score = 91.5 bits (100), Expect = 2e-16 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 |||| |||| |||| |||||||||||| ||||| ||| ||| | ||||||| ||||||| Sbjct 1032330 GTCTTGTTCATTATAGGAATTAACCAGGCAAATTACTTCACTGAATAAGAACAGCCATGC 1032271 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253 ||||||| || |||||| |||||| || || || Sbjct 1032270 ACCACCATGCACAGAATCGGGAAAGAACTTTCCAT 1032236 >seq90 Length=2989883 Score = 73.4 bits (80), Expect = 6e-11 Identities = 49/54 (91%), Gaps = 2/54 (4%) Strand=Plus/Plus Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCT 255 |||||||| |||||||||| |||||| ||||||||||||||||||||||||| Sbjct 1294567 ACTAAGAAGAGCCATGCACC--CACCCACAGAATCAAGAAAGAGCTATCAATCT 1294618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796671007791