Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptonychotes_20weddellii_20[refseq_20GCF_5F000349705.1_202013-03-
29] 16,711 sequences; 3,156,902,762 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq1641 374 3e-101
seq630 367 4e-99
seq2797 354 3e-95
seq378 266 1e-68
seq960 257 5e-66
seq758 241 4e-61
seq1244 210 7e-52
seq528 172 2e-40
seq4526 87.8 6e-15
>seq1641
Length=668455
Score = 374 bits (414), Expect = 3e-101
Identities = 237/257 (92%), Gaps = 0/257 (0%)
Strand=Plus/Minus
Query 239 CCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA 298
|||||||||||||||||||||| ||| |||| | | |||||||||||||||||||
Sbjct 354801 CCCACTTATTCTACACCTCTCATGTCTCCTCACTGTGCCAAACTAGAGTCAAGCTCAACA 354742
Query 299 GGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 358
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 354741 GGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGAT 354682
Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418
||||| |||||||||||||||||||||| ||||||||||||| ||| |||||||||||||
Sbjct 354681 AGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGGGTCGCTAATTAGATGAC 354622
Query 419 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTT 478
|||||||||||||||||||||||||||||||||||| | |||||||||| |||||| ||
Sbjct 354621 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTGCTGCCGTTTACCTGCGCTTCATT 354562
Query 479 GAATTTCTTCACTTTGA 495
|||||||||||||||||
Sbjct 354561 GAATTTCTTCACTTTGA 354545
>seq630
Length=1120681
Score = 367 bits (406), Expect = 4e-99
Identities = 233/253 (92%), Gaps = 0/253 (0%)
Strand=Plus/Plus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||||| ||||||||||||| ||| ||||| | | |||||||||||||||| |
Sbjct 870423 CTCCCACTTACTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCTA 870482
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
|||| ||||||||||||||||||||| |||||||||||||||||||||||||| | || |
Sbjct 870483 CAGGTTCTTCTTTCCCCGCTGATTCCACCAAGCCCGTTCCCTTGGCTGTGGTTCCTCTGG 870542
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct 870543 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCATCACTAATTAGATG 870602
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 870603 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCA 870662
Query 477 TTGAATTTCTTCA 489
|||||||||||||
Sbjct 870663 TTGAATTTCTTCA 870675
>seq2797
Length=342856
Score = 354 bits (392), Expect = 3e-95
Identities = 258/297 (87%), Gaps = 3/297 (1%)
Strand=Plus/Plus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||||||||||||||||||| ||| ||||| | | ||||||||||||||||||
Sbjct 204226 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACTGTGCCAGACTAGAGTCAAGCTCAA 204285
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
||| ||||||||||| ||||||| ||||| ||| |||||| |||||||||||| || |
Sbjct 204286 CAGAATCTTCTTTCCCA-CTGATTCTGCCAAACCCATTCCCTGGGCTGTGGTTTCACTGG 204344
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||| |||||| ||||||| ||| ||| |||||||||| | ||||||||||||||||
Sbjct 204345 ATAGTAGGTAGGGATAGTGGGACTCTTGTTCATCCATTCATACACGTCACTAATTAGATG 204404
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476
| ||||||||||||| |||||||||||| |||||||||| |||||||||| |||||
Sbjct 204405 ATGAGGCATTTGGCTCTCTTAAGAGAGTC--AGTTACTCCCACCGTTTACCCACGCTTCA 204462
Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||||||||||||||||| ||| |||||| |||||||||||| || ||||||
Sbjct 204463 TTGAATTTCTTCACTTTGACATTTAGAACACTGGACAGAAATCACATCGCATCAACA 204519
>seq378
Length=1430629
Score = 266 bits (294), Expect = 1e-68
Identities = 244/303 (81%), Gaps = 8/303 (3%)
Strand=Plus/Plus
Query 224 TGCGCCGAAACGGCT-CCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTC-GGAC 281
||| || | | |||| |||||||| ||||||| || | ||| | ||| | ||| ||
Sbjct 145299 TGCCCCCACAGGGCTTCCCACTTAATCTACACTTCCTATGTCTCTGCACCATGTCAGGTT 145358
Query 282 TAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGG 341
|| ||| ||||||| ||||||||| || | |||| | ||||| |||||||||
Sbjct 145359 TACAGTT----TCAACAGAGTCTTCTTTGACCACAGATTTTTCTAAGCCA-TTCCCTTGG 145413
Query 342 CTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAA-TCTCGTTAATCCATTCATGCG 400
|||||||||| ||||| ||| || |||||||| || | || || ||||||||||||
Sbjct 145414 CTGTGGTTTCATCAGATAATAGCTAAAGACAGTGGAAAATATCATTCATCCATTCATGCA 145473
Query 401 CGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCC 460
||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct 145474 TGTCCCTAATTAGATGGTGGAGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCC 145533
Query 461 GTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 520
|||||||||||||| ||||||||||||||||||||||||||| |||| |||| ||||||
Sbjct 145534 GTTTACCCGCGCTTCATTGAATTTCTTCACTTTGACATTCAGAACACTAGGCAAAAATCA 145593
Query 521 CAT 523
|||
Sbjct 145594 CAT 145596
>seq960
Length=931928
Score = 257 bits (284), Expect = 5e-66
Identities = 182/206 (88%), Gaps = 7/206 (3%)
Strand=Plus/Plus
Query 336 CCTTGG-CTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATT 394
|||||| |||||||||| ||||||||||| |||||||||||||||||||||| |||||||
Sbjct 539162 CCTTGGTCTGTGGTTTCTCTAGATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATT 539221
Query 395 CATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACT 454
||| || | ||||||||||||| ||||||||||||||||||||||||||||||| ||
Sbjct 539222 CATATGCATTACTAATTAGATGA---GGCATTTGGCTACCTTAAGAGAGTCATAGTTGCT 539278
Query 455 CCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAG 514
|| ||| ||||| |||||| ||||| ||||||||||||||||| ||||||||||||||
Sbjct 539279 CCTGCCATTTACTTGCGCTTCATTGAACTTCTTCACTTTGACATTGAGAGCACTGGGCAG 539338
Query 515 AAATCACATTGCGTC---AACATCAC 537
|||||||||||||| ||||||||
Sbjct 539339 GAATCACATTGCGTCAAGAACATCAC 539364
>seq758
Length=958628
Score = 241 bits (266), Expect = 4e-61
Identities = 234/304 (77%), Gaps = 33/304 (11%)
Strand=Plus/Plus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAA----GC 292
|||||||| ||| |||||||||| |||| ||||| | | | |||||||| || ||
Sbjct 527851 CTCCCACTCATTTTACACCTCTCCTGTCACTTCACCATGCCACACTAGAGTGAATGAAGC 527910
Query 293 TCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 352
||||||||||| ||||||| || ||||| ||||||||||||| |
Sbjct 527911 TCAACAGGGTCGTCTTTCC------AT------------GTTCCTTTGGCTGTGGTTTTG 527952
Query 353 CTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTA 412
|| |||||||| |||||||||||||||||| ||| | || || ||||||||||
Sbjct 527953 CTGGATAGTAGGTAGGGACAGTGGGAATCTTGTT--------CCTGTGCATCACTAATTA 528004
Query 413 ---GATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCG 469
| || ||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct 528005 TTAGGTGGTGAGGCATTTGGCTACCTTAAGAGAGTCCTAGTTACTCCCATGATTTACCCA 528064
Query 470 CGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTC 529
|||| ||||||||||||||||||||||| |||||||||| |||||||||||| |||
Sbjct 528065 GGCTTCATTGAATTTCTTCACTTTGACATTTAGAGCACTGGCCAGAAATCACATCATGTC 528124
Query 530 AACA 533
||||
Sbjct 528125 AACA 528128
>seq1244
Length=797082
Score = 210 bits (232), Expect = 7e-52
Identities = 167/198 (84%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 337 CTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCA 396
||||||||||| || || || ||||| |||||||||||||||||| || ||||||||
Sbjct 679254 CTTGGCTGTGGCTTTACTGGACAGTAGGTAGGGACAGTGGGAATCTAATTTATCCATTCG 679195
Query 397 TGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 456
||| | ||| |||||||||||| ||||||||||||||||||| | |||||||||||||||
Sbjct 679194 TGCACATCATTAATTAGATGACAAGGCATTTGGCTACCTTAAAAAAGTCATAGTTACTCC 679135
Query 457 CGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAA 516
|||| ||||| | || | ||||||||||||| ||||||||||||| |||| |||||
Sbjct 679134 CGCCATTTACTCATGC-TCATTGAATTTCTTCATTTTGACATTCAGAATGCTGGACAGAA 679076
Query 517 ATCAC-ATTGCGTCAACA 533
||||| || | |||||||
Sbjct 679075 ATCACAATGGTGTCAACA 679058
>seq528
Length=1277831
Score = 172 bits (190), Expect = 2e-40
Identities = 128/150 (85%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||||||||||||||||||| ||| ||| | | | | | |||||||||| |||||
Sbjct 1270827 CTCCCACTTATTCTACACCTCTCATGTCTCTTCCCCATGCCAGGCTAGAGTCAAACTCAA 1270886
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
|||| |||| ||||| | ||||||| ||||| || | ||||||||||||||||||||| |
Sbjct 1270887 CAGGATCTTTTTTCCTCACTGATTCTGCCAAACCTGGTCCCTTGGCTGTGGTTTCGCTGG 1270946
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTT 386
||||||| |||||| ||||||||||| |||
Sbjct 1270947 ATAGTAGGTAGGGATAGTGGGAATCTTGTT 1270976
>seq4526
Length=112747
Score = 87.8 bits (96), Expect = 6e-15
Identities = 60/68 (88%), Gaps = 0/68 (0%)
Strand=Plus/Plus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||||||||||||||||||| ||| ||||| | | ||||||||||||||||||
Sbjct 57615 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAA 57674
Query 297 CAGGGTCT 304
||||||||
Sbjct 57675 CAGGGTCT 57682
Score = 86.0 bits (94), Expect = 2e-14
Identities = 96/128 (75%), Gaps = 9/128 (7%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| |||| ||||||| |||| |||| | ||||||||||||| ||||
Sbjct 57312 CTTCTGCTCCTTGGGAGGTTTCTGTCCTCCCTGAGCTCGTCTTAGGACACCTGTGTTACC 57371
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||| |||| ||| ||||| |||||||||||||||| || |||| |||||| |
Sbjct 57372 GTTTGACAGGTGTACCGCC----CCAAACTCCCCACCTGGCACTGTC-----CCCGGAGC 57422
Query 127 GGCCCGCG 134
|| ||||
Sbjct 57423 GGGTCGCG 57430
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1634926741728
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |