Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptonychotes_20weddellii_20[refseq_20GCF_5F000349705.1_202013-03-
29] 16,711 sequences; 3,156,902,762 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq751 122 3e-25
seq2049 91.5 4e-16
seq945 80.6 8e-13
>seq751
Length=1050645
Score = 122 bits (134), Expect = 3e-25
Identities = 117/146 (80%), Gaps = 7/146 (5%)
Strand=Plus/Plus
Query 4 CTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCC 62
||||||||||||||| | || || |||| ||||||| | || |||||| ||| ||||
Sbjct 1037236 CTCATTCCAATTACAGGGCCTCAGAAGACTCCTGTATTATTA-TTATTG---CTATCTCC 1037291
Query 63 CCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTC 122
| ||||||| |||||||||| || |||||||||| | ||||| ||||| || ||||
Sbjct 1037292 C--GGTCGGGAGGGGGTAATTTGTGCACCTGCTGCCTGCTTTGGACGTGGTCGCTGTTTT 1037349
Query 123 TCAGGCTCCCTCTCCGGAATCGAACC 148
|||| ||||||||| |||||| ||||
Sbjct 1037350 TCAGCCTCCCTCTCTGGAATCAAACC 1037375
>seq2049
Length=615634
Score = 91.5 bits (100), Expect = 4e-16
Identities = 107/145 (74%), Gaps = 11/145 (8%)
Strand=Plus/Plus
Query 49 TTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGA- 107
|||||| ||| | || | ||| ||| || ||||| || | |||||||||||||||||||
Sbjct 556331 TTGTCATTACTTTCCTGGGTCAGGAGTGAGTAATCTGTGAGCCTGCTGCCTTCCTTGGAA 556390
Query 108 ---------TGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCC 158
|||||||| ||||||||||||||||| | |||| || |||||| ||
Sbjct 556391 ACTAGAAACAATGGTAGCCATTTCTCAGGCTCCCTCTTTGAAATCAAATGCTAATT-CCT 556449
Query 159 GTTACCCGTTGATACCATGGTAGGC 183
| | |||| | ||||||||||||
Sbjct 556450 TTCATCCGTGGTCACCATGGTAGGC 556474
>seq945
Length=1005071
Score = 80.6 bits (88), Expect = 8e-13
Identities = 84/108 (78%), Gaps = 2/108 (2%)
Strand=Plus/Minus
Query 76 GGGTAATTTGCGCGCCTGCT-GCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTC 134
||| ||||||| | |||||| |||||||||||| | | |||| |||| |||| |||||||
Sbjct 834072 GGGCAATTTGCACACCTGCTTGCCTTCCTTGGACGGGATAGCTGTTTGTCAGACTCCCTC 834013
Query 135 TCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGG 182
||| || || | || ||||||| | | ||| || | || |||||||
Sbjct 834012 TCCTGACAGGAGCTCTGATTCCCCATCA-CCGATGGTTCCGTGGTAGG 833966
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510147597056
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |