Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq29572 174 2e-41
seq29577 159 5e-37
seq21249 102 1e-19
seq9044 96.9 5e-18
>seq29572
Length=8466069
Score = 174 bits (192), Expect = 2e-41
Identities = 182/234 (78%), Gaps = 4/234 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || ||||||| || || ||||| ||| |||||| |||||| |
Sbjct 5821930 GTACAAAGGGCAGGGACTTAATCAACGCAAGATT-ATGACCCGCACTTACTGGGAATT-C 5821873
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA-TGAAATTTCAAAGATT 119
|||||| | | || ||||||||| | |||||||| |||| || ||| | || ||
Sbjct 5821872 CTCGTTCATGGGGAATAATTGCAATCCCCGATCCCCATTACGAATGGGATTCAACAGGTT 5821813
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||||| |||| |||| ||| | || || ||| ||||||||||||||||||
Sbjct 5821812 ACCCGCGCCTGCCGGCGTAGGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCA 5821753
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
|||| | |||||||||||||||||||||||||||||| ||||| || |||||
Sbjct 5821752 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 5821700
>seq29577
Length=937630
Score = 159 bits (176), Expect = 5e-37
Identities = 183/236 (78%), Gaps = 9/236 (4%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || ||||||| ||||| ||||| ||| |||||| |||||| |
Sbjct 137987 GTACAAAGGGCAGGGACTTAATCAACGCAAGCTT-ATGACCCGCACTTACTGGGAATT-C 137930
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||| | | || ||||||||| | ||||| ||||||| ||||| | ||
Sbjct 137929 CTCGTTCATGGGGAATAATTGCAATCCCCGATCCC-ATCACGAATGGGGTTCAACGGGTT 137871
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAG--ACTCGTTGAATACATCAGTGTAGCGCGCGTG 177
||||| |||| | || || || ||| || || ||| |||||||||||||||||
Sbjct 137870 ACCCGCGCCTGCCAGCGTAG-TG-TAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTG 137813
Query 178 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
| |||| | |||||||||||||||||||||||||||||| ||||| || |||||
Sbjct 137812 CAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 137758
>seq21249
Length=1240507
Score = 102 bits (112), Expect = 1e-19
Identities = 156/218 (72%), Gaps = 7/218 (3%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || | || ||||| |||| | | |||||| |||||| |
Sbjct 37668 GTACAAAGGGCAGGGACTTAAT----GCAAGCTTC-TGACCCACACTTACTGGGAATT-C 37615
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA-TGAAATTTCAAAGATT 119
||| | | | || ||| ||| | | ||||||||||| | || ||| | ||
Sbjct 37614 CTCACTCATGGGGAATAATGGCAGTCCCCCATCCCCATCACAAATGGGATTCAGTGGGTT 37555
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||| | |||| | || ||| | || || ||| ||||||||||||||||||
Sbjct 37554 ACCTGCTCCTGCCAGCGTAGGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCA 37495
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217
|||| | ||| ||||||||||||||| |||||||||||
Sbjct 37494 GCCCCGGACACCTAAGGGCATCACAGCCCTGTTATTGC 37457
>seq9044
Length=2178216
Score = 96.9 bits (106), Expect = 5e-18
Identities = 165/232 (71%), Gaps = 8/232 (3%)
Strand=Plus/Minus
Query 5 AAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCG 64
||||||||||||| || ||| ||| | ||| | ||| || || ||| |||||| ||| |
Sbjct 2125356 AAAGGGCAGGGACTTAATCACCGCAAACTT-ACGACCTGCACTCACTGGGAATT-CCTTG 2125299
Query 65 TTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA-TGAAATTTCAAAGATTACCC 123
|| | | || ||||||||| | |||||||||||| || || || | ||||
Sbjct 2125298 TTCATGGGCAGTAATTGCAATCCACGGTCCCCATCACGAATGGGGTTCCATGGGTTACTG 2125239
Query 124 GGACCTGTCGGCCAAGGTGATAG--ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGC 181
| |||| || | || ||| || || ||| | ||||||| | | |||| ||
Sbjct 2125238 GAGCCTGCTGGTGTA--TGGTAGGCACACGCTGAGCCCGCCAGTGTATCTTGTGTGCAGC 2125181
Query 182 CCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
|| ||||| ||||||||||||||||| |||||||| ||||| || |||||
Sbjct 2125180 CCCGAACAGCTAAGGGCATCACAGACGTGTTATTG-CTCAATCTCGGGTGGC 2125130
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751776255795
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |