Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= AAMG01000345.1 Length=193 Score E Sequences producing significant alignments: (Bits) Value seq487 118 1e-24 >seq487 Length=3340 Score = 118 bits (130), Expect = 1e-24 Identities = 135/178 (76%), Gaps = 9/178 (5%) Strand=Plus/Minus Query 5 CTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAAGATA 64 ||||||||||| |||||||| ||||||| ||| |||| |||||| | | |||| Sbjct 1942 CTGAAGCTTAGGAGCTTTTCCTGGAAGCGTGGTATCAGTGACTTCGCCTT---AAAGG-- 1888 Query 65 ACTCGTCATCAGCTCCCGGCCTTAGA--ATCCCGGATTTACCTAAGATTCCAGCCTACCA 122 |||||| || | | ||| |||| | ||||||||||| || ||||| | | |||||| Sbjct 1887 -CTCGTC-TCGGTGCTCGGTCTTAAAGGATCCCGGATTTGCCAAAGATCCAAACCTACCG 1830 Query 123 CCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGCA 180 |||| | |||||||||||||| | |||| |||||||||||||||||||||| Sbjct 1829 CCTTTCCCCCGGACAACCAACGCCGGGTACACCTAACCTTCTCCGTCCCTCCATCGCA 1772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518245759314