Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq15337 179 2e-43 seq19796 176 2e-42 seq21249 140 1e-31 seq18169 96.9 2e-18 >seq15337 Length=5198 Score = 179 bits (198), Expect = 2e-43 Identities = 101/102 (99%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4607 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 4548 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||||||||||||||||||||||| |||||||||| Sbjct 4547 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGAAATGTGGCGTA 4506 >seq19796 Length=4977798 Score = 176 bits (194), Expect = 2e-42 Identities = 100/102 (98%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 953605 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACAGCGAGTGAACAGGGAAGAGCCCAGCG 953546 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||||||||||||||||||||||| |||||||||| Sbjct 953545 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGAAATGTGGCGTA 953504 >seq21249 Length=1240507 Score = 140 bits (154), Expect = 1e-31 Identities = 92/102 (90%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||||||| |||||| |||||| ||||| |||||||||||||||||||| Sbjct 40563 GGAAAAGAAACTAACCAGGGTTCCCTAAGTAACAGCGAGCGAACAGGGAAGAGCCCAGCG 40622 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 | ||||||| |||||| | ||||| |||||| |||||||||| Sbjct 40623 CTGAATCCCTGCCCCGTGCTGGGGAGCGGGAAATGTGGCGTA 40664 >seq18169 Length=553229 Score = 96.9 bits (106), Expect = 2e-18 Identities = 84/102 (82%), Gaps = 2/102 (2%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| |||| ||||||||||| ||| | |||||| ||||||||||| | Sbjct 270080 GGAAAAGAAACTAACAAGGAATCCCTCAGTAATGGCCA-TGAACAATGAAGAGCCCAGGG 270138 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 || | |||| ||||| ||| |||| |||| ||||||| || Sbjct 270139 CCAAGTCCCAGCCCCCAGGT-AGGCGTGGGAAATGTGGCATA 270179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230333659920