Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq21249 197 2e-48
seq29577 116 6e-24
seq29572 116 6e-24
seq499 111 3e-22
seq167 104 4e-20
seq9044 89.7 8e-16
seq2971 86.0 1e-14
>seq21249
Length=1240507
Score = 197 bits (218), Expect = 2e-48
Identities = 197/250 (79%), Gaps = 9/250 (4%)
Strand=Plus/Minus
Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74
||||||||||||||||||| |||| | ||| ||||||||||||||| ||||||||||| |
Sbjct 37514 GTCAGTGTAGCGCGCGTGCAGCCCCGGACACCTAAGGGCATCACAGCCCTGTTATTGC-T 37456
Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCA--CCAACC---- 128
|| ||| | ||| ||| | |||| ||||| ||| | | ||||||
Sbjct 37455 CAGTCTTGGGTAA-CTGATCACCACTTGTCCGTCTAAAAAGTTGGGGATGCCAACCGCTC 37397
Query 129 ATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACA 188
| || || ||| |||||| || | ||||| ||||||||||||||||||||||||
Sbjct 37396 AGTGTTCATTAA-CTAGTTAGCATGTCAGAGTCTCATTCGTTATCGGAATTAACCAGACA 37338
Query 189 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTA 248
| || |||||||| ||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 37337 AGTCGCTCCACCAGCTAAGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAGCTA 37278
Query 249 TCAATCTGTC 258
||||||||||
Sbjct 37277 TCAATCTGTC 37268
>seq29577
Length=937630
Score = 116 bits (128), Expect = 6e-24
Identities = 88/101 (87%), Gaps = 2/101 (2%)
Strand=Plus/Minus
Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74
||||||||||||||||||| |||| | |||||||||||||||||||||||||||||| ||
Sbjct 137830 GTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CT 137772
Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115
||| | || |||||| | |||| | ||||||||||||||
Sbjct 137771 CAATC-TCGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAG 137732
>seq29572
Length=8466069
Score = 116 bits (128), Expect = 6e-24
Identities = 88/101 (87%), Gaps = 2/101 (2%)
Strand=Plus/Minus
Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74
||||||||||||||||||| |||| | |||||||||||||||||||||||||||||| ||
Sbjct 5821772 GTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CT 5821714
Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115
||| | || |||||| | |||| | ||||||||||||||
Sbjct 5821713 CAATC-TCGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAG 5821674
>seq499
Length=2255841
Score = 111 bits (122), Expect = 3e-22
Identities = 73/81 (90%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
||| |||||| | | |||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1444292 CTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCA 1444351
Query 202 ACTAAGAACGGCCATGCACCA 222
||||||| |||||||||||||
Sbjct 1444352 ACTAAGATCGGCCATGCACCA 1444372
>seq167
Length=1357166
Score = 104 bits (114), Expect = 4e-20
Identities = 144/195 (74%), Gaps = 10/195 (5%)
Strand=Plus/Plus
Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74
|||||||||||| ||||| ||| | |||||||||| |||||||||||||||||| ||
Sbjct 69554 GTCAGTGTAGCGTGCGTGTAGCCATGGACATCTAAGGTAATCACAGACCTGTTATTG-CT 69612
Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAA---GCCAGCCACC-AACCAT 130
||| | || |||||| | |||| | ||||||||||||| | || | || || |
Sbjct 69613 CAATC-TCGGGTGGCTGAAGGCCACTTGTCCCTCTAAGAAGTTGGAAGACGCCAAATGCT 69671
Query 131 AGTCG---ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187
| || ||| | || |||||| | || |||| || ||||| |||||||| ||||
Sbjct 69672 TGGCGGTTATGTGACT-GTTAGCATGCTAGAGTCTTATTTGTTATTGGAATTAAGTAGAC 69730
Query 188 AAATCACTCCACCAA 202
| || |||||||||
Sbjct 69731 AGATTGCTCCACCAA 69745
>seq9044
Length=2178216
Score = 89.7 bits (98), Expect = 8e-16
Identities = 83/103 (81%), Gaps = 2/103 (2%)
Strand=Plus/Minus
Query 13 CCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 72
||| ||||||| | | |||| |||| ||||| ||||||||||||||||| ||||||||
Sbjct 2125204 CCGCCAGTGTATCTTGTGTGCAGCCCCGAACAGCTAAGGGCATCACAGACGTGTTATTG- 2125146
Query 73 CTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115
||||| | || |||||| | |||| | |||| |||||||||
Sbjct 2125145 CTCAATC-TCGGGTGGCTGAATGCCACTTGTCCTTCTAAGAAG 2125104
>seq2971
Length=1532903
Score = 86.0 bits (94), Expect = 1e-14
Identities = 89/116 (77%), Gaps = 7/116 (6%)
Strand=Plus/Plus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
||| |||||| | | ||||| || | ||| ||||||||||||||||| |||||
Sbjct 1431792 CTAGTTAGCATGCCAGAGTCTCATTTGGTATAGGAATTAACCAGACAAACGTTTCCACTC 1431851
Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGT 257
| |||||| ||||| |||||||| ||||||||||||| |||||||| ||||
Sbjct 1431852 ATTAAGAA------TGCAC-ACCACCCACAGAATCAAGAAAGTGCTATCAACCTGT 1431900
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796562926353
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |