Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq15337 351 2e-94
seq23370 181 2e-43
seq17107 172 9e-41
seq11385 170 3e-40
seq15537 105 1e-20
seq487 73.4 7e-11
>seq15337
Length=5198
Score = 351 bits (388), Expect = 2e-94
Identities = 255/294 (87%), Gaps = 1/294 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||| ||| | |||||||| | | || |||||||||||||||||||||||||||||
Sbjct 316 TACTGAGCAGGATTACCATGGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 375
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 376 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG 435
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179
||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 436 AATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 495
Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct 496 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCT 555
Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
| ||| | | || | |||||||| ||||| | |||||| ||| |||||||
Sbjct 556 TAAAACCCCAAAGGTCAGAAGGATCGTGAGGCCCCGCTTTCACGGTCTGTATTC 609
>seq23370
Length=4990973
Score = 181 bits (200), Expect = 2e-43
Identities = 200/264 (76%), Gaps = 3/264 (1%)
Strand=Plus/Minus
Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92
||||||||||| ||||| || ||||||| ||||| || ||||||||||||||||| ||
Sbjct 2036155 ATCAGTAGGGTGAAACTCACGTGTCTCACGACGGAGAAATCCCAGCTCACGTTCCCTGTT 2036096
Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152
|||||||||||||||||| |||| || | |||||| ||||||||||||||| ||
Sbjct 2036095 AGTGGGTGAACAATCCAATGCTTGGTAAACTGTGCTTCACAATGATAGGAAGAGCCAACG 2036036
Query 153 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTA--TCC 210
| || | ||||||| | |||||||||| |||| | ||||||| |||||| |
Sbjct 2036035 GC-AAATACGGAAAAGCAGCATCGCTATGAATGCTTCGTCACCACAAGTCAGTTATGTAG 2035977
Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270
|| |||||||||||||| |||||| | | ||| | | || | ||||| | |||
Sbjct 2035976 CTCTGGTAACTTTTCTGACACCTCCTACTTAAAACTCAAAAGGTCAGGAGGATTGTGAGG 2035917
Query 271 CCACACTTTCATGGTTTGTATTCA 294
|| |||||||| || || |||||
Sbjct 2035916 CCCCACTTTCACAGTCTGGATTCA 2035893
>seq17107
Length=2850787
Score = 172 bits (190), Expect = 9e-41
Identities = 131/155 (85%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 138 TAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCAC 197
|||| ||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct 671199 TAGGCAGAGCTGACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCAC 671140
Query 198 AAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTA 257
|||||||||||||||||||||||||||||| |||||| || | ||| | | || |
Sbjct 671139 AAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCTTAAAACCCCAAAGGTCAG 671080
Query 258 AAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292
|||||||| |||| | |||||| ||| ||||||
Sbjct 671079 AAGGATCGTGGGGCCCCGCTTTCACGGTCTGTATT 671045
>seq11385
Length=11539319
Score = 170 bits (188), Expect = 3e-40
Identities = 115/129 (89%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 105 ATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAA 164
||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||
Sbjct 3563113 ATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCAAAGGATCAA 3563054
Query 165 AAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224
|||| ||||||||||| ||||||||| |||||||||||||||||||||||||| ||||
Sbjct 3563053 AAAGTGACGTCGCTATGGACGCTTGGCCACCACAAGCCAGTTATCCCTGTGGTAATTTTT 3562994
Query 225 CTGGCACCT 233
||| |||||
Sbjct 3562993 CTGACACCT 3562985
>seq15537
Length=4864269
Score = 105 bits (116), Expect = 1e-20
Identities = 143/194 (74%), Gaps = 8/194 (4%)
Strand=Plus/Minus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
|||||||| ||||||||| | ||||| || | || | |||| ||||| ||| ||
Sbjct 4147919 TCATCAGTCAGGTAAAACTGTTTTATCTCACGATAGCCTGATCCCACCTCACATTCT-TA 4147861
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150
||||| ||||||||||||||| || | |||||||| || || ||| ||| ||
Sbjct 4147860 TTAGTAGGTGAACAATCCAACACTGGGTAAGGTCTGCTTC---ATAAT--GAAAAGCTGA 4147806
Query 151 CATCGAAGGATCAAAAAGCA-ACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209
||| ||||| |||||||| | || ||||||||| ||||| |||| ||||||||
Sbjct 4147805 TATCCAAGGACTAAAAAGCAGAAGT-GCTATGAACACTTGGTCAACACATTGCAGTTATC 4147747
Query 210 CCTGTGGTAACTTT 223
| |||| |||||||
Sbjct 4147746 CTTGTGATAACTTT 4147733
>seq487
Length=3340
Score = 73.4 bits (80), Expect = 7e-11
Identities = 122/175 (70%), Gaps = 6/175 (3%)
Strand=Plus/Minus
Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112
|||||||| |||| ||| |||||||||| ||| || ||| || ||||| | ||
Sbjct 2955 CTGTCTCACGACGTTCTGAACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCATACC 2896
Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169
||| ||||| | | || | | ||| || ||||||||||||| | |||| | |
Sbjct 2895 CTTGGGACCGACTACAGCCCCAGGATGT---GATGAGCCGACATCGAGGTGCCAAACACC 2839
Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224
||||| ||||||| ||||| | | |||| |||||||| | ||| |||||
Sbjct 2838 GCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTT 2784
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854137588128
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |