Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq487 181 2e-43 >seq487 Length=3340 Score = 181 bits (200), Expect = 2e-43 Identities = 180/231 (78%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 ||||| |||| | ||| |||||||||||||||||| ||||| ||||||||||||||| Sbjct 2574 GGGACCGTGTATGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGA 2633 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC--AGTGCAAAGGCAAAAGGG 228 || | ||| ||| |||||| || ||| | | |||||| ||||||||||| ||| | Sbjct 2634 GCTCGAAGGTACGCTCAGCGCGGTCGGACATC--GCGCACTGTGTGCAAAGGCATAAGCG 2691 Query 229 TGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCG 288 || |||||||| | | | | || |||||| | |||| | || |||| |||||||| | Sbjct 2692 TGCTTGACTGCAAGATCGACGGATCAAGCAGGTAGGAAACTAGGACTTAGTGATCCGGTG 2751 Query 289 GTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 || ||| |||||| |||| |||||| ||||||||||| ||| | ||||||| Sbjct 2752 GTTCTGTATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATA 2802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982098275488