Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= AAMG01001151.1 Length=269 Score E Sequences producing significant alignments: (Bits) Value seq1685 96.9 5e-18 seq11692 73.4 6e-11 >seq1685 Length=737 Score = 96.9 bits (106), Expect = 5e-18 Identities = 101/122 (83%), Gaps = 8/122 (7%) Strand=Plus/Plus Query 2 CCGCAGAAACGCCGGGTTTCCACAGGCGTACCGGCGCCGGCCCCTTCGCCCTTCGGGCAG 61 ||||||||| ||||||| ||||| | ||||| ||||||||||| |||||| |||||| Sbjct 624 CCGCAGAAAT-CCGGGTT-CCACAAATGCACCGGTGCCGGCCCCTT-GCCCTT-GGGCAG 679 Query 62 TTCGGGCCAACAGATCGTTCGGCCTTCGGCGGAATCGGTCATAGGGCATCTCCTGTGTCT 121 || ||||||| ||||| || |||||| ||||||||||||||| || ||||| ||||| Sbjct 680 TT-GGGCCAATAGATCATT-GGCCTT-GGCGGAATCGGTCAT-GGCGGGCTCCTCTGTCT 735 Query 122 TA 123 || Sbjct 736 TA 737 >seq11692 Length=22366 Score = 73.4 bits (80), Expect = 6e-11 Identities = 105/147 (71%), Gaps = 1/147 (1%) Strand=Plus/Plus Query 124 CTGATCG-CTCATGCCCAGCAGGCCACGGGCGTATTTGGCCAGGGGGCGGGCGATCAGGT 182 || |||| |||||||| || |||| ||| ||||| | | || ||| || | || | Sbjct 17680 CTCATCGACTCATGCCAAGAAGGCTACGAGCGTACTCGCGCATGGGCGCAGCAAGCAAAT 17739 Query 183 CTTCTGGCTTGTTGTCGTGGAACGTCAGTAAACCGCCACGGCTGCGAATACGCACAGTAT 242 | ||| | | |||||||||||||| |||||||||||||| ||||| || || | Sbjct 17740 CCCTGGGCGTCTGGTCGTGGAACGTCAACAAACCGCCACGGCTTTTGATACGGACCGTGT 17799 Query 243 CAATCAAATACTGGGTGCTGGTCTCGA 269 | |||| || |||| ||||| |||| Sbjct 17800 CTATCAGGTAGCGGGTACTGGTTTCGA 17826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 761373399486