Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= AAMG01001161.1 Length=375 Score E Sequences producing significant alignments: (Bits) Value seq3218 412 8e-113 seq25100 102 2e-19 >seq3218 Length=2362 Score = 412 bits (456), Expect = 8e-113 Identities = 327/374 (87%), Gaps = 14/374 (4%) Strand=Plus/Plus Query 1 GCGACGTAGAATGTTCGTTTCGGCAGGTCTTTCGCCAGCCGGAATCTTCGCTTGTAGCTT 60 |||||||||| ||| |||| ||||||| |||| ||||||||||||||| ||| |||||| Sbjct 1201 GCGACGTAGA-TGT-CGTT-CGGCAGGGCTTT-GCCAGCCGGAATCTT-GCT-GTAGCT- 1253 Query 61 CATTCGGGCGTTGCCCCCGTTAATTCGGCCAAGAAACTTCGGCCGGATTGGCCTAAAAGT 120 |||| ||||||||||||||||| || ||||| || | |||||||||||||||||||| Sbjct 1254 CATT-GGGCGTTGCCCCCGTTAGTT-GGCCATATGACAT-GGCCGGATTGGCCTAAAAGT 1310 Query 121 TGGCGGCGATTATAGGCACATTCTGGCGCCGATGCCATTGCGCCAGAACGTCGTACGGTC 180 ||||||||||||||||| |||||| |||||||||||| |||||| | |||||||||||| Sbjct 1311 -GGCGGCGATTATAGGCATATTCTGACGCCGATGCCAT-GCGCCA-AGCGTCGTACGGTC 1367 Query 181 ATTCGTCTTTGCGGCTGATAACGCGGGTCGCTGGCTTGCAGTTGGTGCAGGCGGGCCAGG 240 ||||| | | | ||| || ||||||||||||||||||||||| |||||||||||| Sbjct 1368 ATTCGCCCT-GTGGCGAGTAGCGCGGGTCGCTGGCTTGCAGTTGAGTCAGGCGGGCCAGC 1426 Query 241 GTGTCCTGGCGATAAAAGCGGCTGAGTTGGGCGTACACCTGTGGATAACGATTGACCAGT 300 | || |||||||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct 1427 GGATCTTGGCGATAAAAGCGGCTGAGTTGGGCGTACACCTCTGGATAACTATTGACCAGT 1486 Query 301 AAATCCGGGGCGCTGAAAAAGTATTCGCTGGTGACGGCAAAGAACTCCGCCGGGTTTTCG 360 ||||||||||||||||| || ||||| ||||||||||||||||| |||||||||||||| Sbjct 1487 AAATCCGGGGCGCTGAAGAAATATTCACTGGTGACGGCAAAGAATTCCGCCGGGTTTTCC 1546 Query 361 GCGGCGTAGGGGTC 374 || ||||| ||||| Sbjct 1547 GCAGCGTAAGGGTC 1560 >seq25100 Length=6666 Score = 102 bits (112), Expect = 2e-19 Identities = 264/384 (69%), Gaps = 49/384 (13%) Strand=Plus/Plus Query 1 GCGACGTAGAATGTTCGTTTCGGCAGGTCTTTCGCCAGCCGGAATCTTCGCTTGTAGCTT 60 |||||||||| ||| |||| |||||||||||| ||| ||||||||||| ||| |||||| Sbjct 6209 GCGACGTAGA-TGT-CGTT-CGGCAGGTCTTT-GCCCGCCGGAATCTT-GCT-GTAGCT- 6261 Query 61 CATTCGGGCGTTGCCCCCGTTAATTCGGCCAAGAAACTTCGGCCGGATTGGCCTAAAAGT 120 |||| |||| ||||||||| || | |||| |||||| Sbjct 6262 CATT-GGGCAGTGCCCCCGTG--TTTGACCAA----------------------AAAAGT 6296 Query 121 TGGCGGCGATTATAGGCACATTCTGGCGCCG-ATGCCAT---TGCGCCA--GAACGTCGT 174 ||||||||||||||||| |||| | || | |||||| || ||| |||| || Sbjct 6297 -GGCGGCGATTATAGGCATATTCCGACGGGGCATGCCACGTCTGGCCCAATGAAC--CGG 6353 Query 175 ACGGTCATTCGTCTTTGCGGCTGATAACGCGGGTCGCTGGCTT-GCAGTTGGTGCAGGCG 233 || | | || ||| |||| |||| ||| |||| ||| || |||||| Sbjct 6354 GCGCT-AGGCGGGGGGATGGC-GATAGT-CGGGATGCTCGCTTTGCAACCGGGTCAGGCG 6410 Query 234 GGCCAGGGTGTCCTGGCGATAAAA--GCGGCTGAGTTGGGCGTACACCTGTGGATAACGA 291 || || | || ||| || || || ||| | ||||| ||| |||| || || Sbjct 6411 TGCAAGCGGGTTCTGCCGGTAGAACAGCGAC--AGTTGCTGGTAGACCTCGGGGTAGGCC 6468 Query 292 TTGACCAGTAAATCCGGGGCGCTGAAAAAGTATTCGCTGGTGACGGCAAAGAACTCCGCC 351 | | ||| | || ||||||||||| ||||| |||||||| ||||| |||||||| || Sbjct 6469 TGGTGCAGCAGGTCGGGGGCGCTGAAGAAGTACTCGCTGGTTACGGCGAAGAACTCGGCG 6528 Query 352 GGGTTTTCGGCGGCGTAGGGGTCG 375 |||||||||||||| || |||||| Sbjct 6529 GGGTTTTCGGCGGCATAAGGGTCG 6552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1097262894112