Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= AAMG01001161.1
Length=375
Score E
Sequences producing significant alignments: (Bits) Value
seq3218 412 8e-113
seq25100 102 2e-19
>seq3218
Length=2362
Score = 412 bits (456), Expect = 8e-113
Identities = 327/374 (87%), Gaps = 14/374 (4%)
Strand=Plus/Plus
Query 1 GCGACGTAGAATGTTCGTTTCGGCAGGTCTTTCGCCAGCCGGAATCTTCGCTTGTAGCTT 60
|||||||||| ||| |||| ||||||| |||| ||||||||||||||| ||| ||||||
Sbjct 1201 GCGACGTAGA-TGT-CGTT-CGGCAGGGCTTT-GCCAGCCGGAATCTT-GCT-GTAGCT- 1253
Query 61 CATTCGGGCGTTGCCCCCGTTAATTCGGCCAAGAAACTTCGGCCGGATTGGCCTAAAAGT 120
|||| ||||||||||||||||| || ||||| || | ||||||||||||||||||||
Sbjct 1254 CATT-GGGCGTTGCCCCCGTTAGTT-GGCCATATGACAT-GGCCGGATTGGCCTAAAAGT 1310
Query 121 TGGCGGCGATTATAGGCACATTCTGGCGCCGATGCCATTGCGCCAGAACGTCGTACGGTC 180
||||||||||||||||| |||||| |||||||||||| |||||| | ||||||||||||
Sbjct 1311 -GGCGGCGATTATAGGCATATTCTGACGCCGATGCCAT-GCGCCA-AGCGTCGTACGGTC 1367
Query 181 ATTCGTCTTTGCGGCTGATAACGCGGGTCGCTGGCTTGCAGTTGGTGCAGGCGGGCCAGG 240
||||| | | | ||| || ||||||||||||||||||||||| ||||||||||||
Sbjct 1368 ATTCGCCCT-GTGGCGAGTAGCGCGGGTCGCTGGCTTGCAGTTGAGTCAGGCGGGCCAGC 1426
Query 241 GTGTCCTGGCGATAAAAGCGGCTGAGTTGGGCGTACACCTGTGGATAACGATTGACCAGT 300
| || |||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct 1427 GGATCTTGGCGATAAAAGCGGCTGAGTTGGGCGTACACCTCTGGATAACTATTGACCAGT 1486
Query 301 AAATCCGGGGCGCTGAAAAAGTATTCGCTGGTGACGGCAAAGAACTCCGCCGGGTTTTCG 360
||||||||||||||||| || ||||| ||||||||||||||||| ||||||||||||||
Sbjct 1487 AAATCCGGGGCGCTGAAGAAATATTCACTGGTGACGGCAAAGAATTCCGCCGGGTTTTCC 1546
Query 361 GCGGCGTAGGGGTC 374
|| ||||| |||||
Sbjct 1547 GCAGCGTAAGGGTC 1560
>seq25100
Length=6666
Score = 102 bits (112), Expect = 2e-19
Identities = 264/384 (69%), Gaps = 49/384 (13%)
Strand=Plus/Plus
Query 1 GCGACGTAGAATGTTCGTTTCGGCAGGTCTTTCGCCAGCCGGAATCTTCGCTTGTAGCTT 60
|||||||||| ||| |||| |||||||||||| ||| ||||||||||| ||| ||||||
Sbjct 6209 GCGACGTAGA-TGT-CGTT-CGGCAGGTCTTT-GCCCGCCGGAATCTT-GCT-GTAGCT- 6261
Query 61 CATTCGGGCGTTGCCCCCGTTAATTCGGCCAAGAAACTTCGGCCGGATTGGCCTAAAAGT 120
|||| |||| ||||||||| || | |||| ||||||
Sbjct 6262 CATT-GGGCAGTGCCCCCGTG--TTTGACCAA----------------------AAAAGT 6296
Query 121 TGGCGGCGATTATAGGCACATTCTGGCGCCG-ATGCCAT---TGCGCCA--GAACGTCGT 174
||||||||||||||||| |||| | || | |||||| || ||| |||| ||
Sbjct 6297 -GGCGGCGATTATAGGCATATTCCGACGGGGCATGCCACGTCTGGCCCAATGAAC--CGG 6353
Query 175 ACGGTCATTCGTCTTTGCGGCTGATAACGCGGGTCGCTGGCTT-GCAGTTGGTGCAGGCG 233
|| | | || ||| |||| |||| ||| |||| ||| || ||||||
Sbjct 6354 GCGCT-AGGCGGGGGGATGGC-GATAGT-CGGGATGCTCGCTTTGCAACCGGGTCAGGCG 6410
Query 234 GGCCAGGGTGTCCTGGCGATAAAA--GCGGCTGAGTTGGGCGTACACCTGTGGATAACGA 291
|| || | || ||| || || || ||| | ||||| ||| |||| || ||
Sbjct 6411 TGCAAGCGGGTTCTGCCGGTAGAACAGCGAC--AGTTGCTGGTAGACCTCGGGGTAGGCC 6468
Query 292 TTGACCAGTAAATCCGGGGCGCTGAAAAAGTATTCGCTGGTGACGGCAAAGAACTCCGCC 351
| | ||| | || ||||||||||| ||||| |||||||| ||||| |||||||| ||
Sbjct 6469 TGGTGCAGCAGGTCGGGGGCGCTGAAGAAGTACTCGCTGGTTACGGCGAAGAACTCGGCG 6528
Query 352 GGGTTTTCGGCGGCGTAGGGGTCG 375
|||||||||||||| || ||||||
Sbjct 6529 GGGTTTTCGGCGGCATAAGGGTCG 6552
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1097262894112
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |