Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= AAMG01001182.1 Length=261 Score E Sequences producing significant alignments: (Bits) Value seq19832 242 5e-62 seq16043 170 3e-40 >seq19832 Length=2079 Score = 242 bits (268), Expect = 5e-62 Identities = 208/256 (81%), Gaps = 1/256 (0%) Strand=Plus/Minus Query 1 CGATGCACGCCTTGACGCAGCGAGCCAGGACTTCTTCGCGCGCTTTTTTCGTCCAGGCCC 60 |||||||||| | |||||||| | ||||| | ||||||||| | |||| | ||| Sbjct 949 CGATGCACGCGTCCACGCAGCGCTTGAACACTTCCTGGCGCGCTTTCT-CGTCGATGCCT 891 Query 61 GGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCGGTCG 120 || ||||| || |||||||| ||||||||||| || |||||||||||||| || ||||| Sbjct 890 GGGGCCGGAGCCTCTTCCAGCACCTTCTGGTGGCGGCGTTGCAGCGAGCAGTCACGGTCA 831 Query 121 CCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACGTGGG 180 || |||||||| || | ||||||||||||||||| || || |||||||||||||||||| Sbjct 830 CCGAGGTGGATCGCATTGCCCTGGCCGTCGGACAAGACCTGTACTTCCACGTGACGTGGG 771 Query 181 TTGGTCAGGTACTTTTCCAGGTAGACCATCGGGTTGCCGAACCAGGCGCCCGCTTCGGAG 240 ||||||||| |||| |||| ||| ||||||||||||||||| || || ||||||| Sbjct 770 TTGGTCAGGAACTTCTCCAAGTACACCATCGGGTTGCCGAAGGCTGCACCGGCTTCGGTA 711 Query 241 CGAGTCTGCTTGGCCG 256 || || ||||||||| Sbjct 710 CGGGTGAGCTTGGCCG 695 >seq16043 Length=829 Score = 170 bits (188), Expect = 3e-40 Identities = 116/129 (90%), Gaps = 1/129 (1%) Strand=Plus/Plus Query 1 CGATGCACGCCTTGACGCAGCGAGCCAGGACTTCTTCGCGCGCTTTTTTCGTCCAGGCCC 60 ||||||||||||||||||| || ||||| ||||| | ||| ||||| | ||||||||||| Sbjct 702 CGATGCACGCCTTGACGCAACGCGCCAGTACTTCCTGGCGGGCTTTCT-CGTCCAGGCCC 760 Query 61 GGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCGGTCG 120 |||||||| |||||||||| |||||||||||| ||||||||||||||||||||||| || Sbjct 761 GGTGCCGGGGCTTCTTCCAATACCTTCTGGTGGCGACGTTGCAGCGAGCAATCGCGATCA 820 Query 121 CCCAGGTGG 129 ||||||||| Sbjct 821 CCCAGGTGG 829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 735781016310