Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= AAMG01001213.1
Length=600
Score E
Sequences producing significant alignments: (Bits) Value
seq487 269 1e-69
>seq487
Length=3340
Score = 269 bits (298), Expect = 1e-69
Identities = 395/547 (72%), Gaps = 25/547 (5%)
Strand=Plus/Minus
Query 49 TCCCGGCATTCGGAGTTTGGT-TGATTTCGGTAAG-CTTGTGGGCCCCCTAGACCATC-C 105
|| ||| |||||||||||| || ||| |||||| | | | |||||||| |||| |
Sbjct 1283 TCTCGGTATTCGGAGTTTGCAATGGTTT-GGTAAGTCGCGATGACCCCCTAG-CCATAAC 1226
Query 106 AGTGCTCTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAAC 165
||||||||||| ||| || || ||| || || |||||||| ||||| |||||||
Sbjct 1225 AGTGCTCTACCCCCGAGAGGATACATATGAGGCGCTACCTAAATAGCTTTCGAGGAGAAC 1166
Query 166 CAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTT 225
|||||||| | ||| |||| || |||||| |||| ||||| |||||||| |||
Sbjct 1165 CAGCTATCTCCGGGTTCGATTAGCTTTTCACTCCTAATCACAGCTCATCCCCGTCTTTTG 1106
Query 226 CAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGAT 285
|||| | |||||||||| |||||| | |||| ||||| |||| ||||| |
Sbjct 1105 CAACAGACGTGGGTTCGGGCCTCCAGTACCTGTTACGGCACCTTCACCCTGGCCATGACT 1046
Query 286 AGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTC 345
||||||| | ||||||||| | || ||| || |||||| || |||||| ||||
Sbjct 1045 AGATCACCCGGTTTCGGGTCTACTGCCCGCGACT-ATGCGCCCTTATCAGACTCGGTTTC 987
Query 346 GCTACGGCTACCCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCT 405
|| || || ||| | || |||||| || || || ||| || |||| | | |||| |
Sbjct 986 CCTTCGCCTCCCCTATAC-GGTTAAGCTTGCCAC-GAACAGTAAGTCGCTGACCCATTAT 929
Query 406 TCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTC-AGCTCCGACGGATTGTAGG 464
||||||| |||| ||||| || ||| |||||| || | ||||| |
Sbjct 928 ACAAAAGGTACGCAGTCAC------TCT---------TTCGAGCTCCTACTGCTTGTACG 884
Query 465 CACATGGTTTCAGGTACTATTTCACTCCCCGC-CAGGGGTACTTTTCACCTTTCCCTCAC 523
|||| ||||||||| |||||||||||||| | | ||||| |||||| ||||||||||||
Sbjct 883 CACACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCAC 824
Query 524 GGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGA 583
|||||| || | ||||||||| || ||||||||| ||| || ||||||| |||
Sbjct 823 GGTACTGGTTCACTATCGGTCGGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATG 764
Query 584 TTCACAC 590
|||| ||
Sbjct 763 TTCAGAC 757
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1817041760512
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |