Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= AAMG01001228.1
Length=576
Score E
Sequences producing significant alignments: (Bits) Value
seq29526 365 2e-98
seq3412 156 1e-35
>seq29526
Length=416
Score = 365 bits (404), Expect = 2e-98
Identities = 335/419 (80%), Gaps = 22/419 (5%)
Strand=Plus/Plus
Query 98 CGCGGCGCAGGGCCATGCACGGCGGCGCAGCATCGGCGAGGTGCT---CAGTCG------ 148
||| || |||||||||| || || ||||| ||||| ||||| || ||| ||
Sbjct 1 CGCCGCCGAGGGCCATGCCCGACGTCGCAGTATCGGTGAGGTACTGGCCAGCCGGGTGGT 60
Query 149 ----CCG----TGCATAAATGCAATAACGACCTGCAGGATTCCCCGGTGTACTGGGCAAA 200
||| ||||||||||||| |||||||||||||||||| | |||||||||||||
Sbjct 61 TTGACCGGCACTGCATAAATGCAACAACGACCTGCAGGATTCCGGGTTGTACTGGGCAAA 120
Query 201 TGTGCACTGGTAGGATCGCAAGAAGGTTCGTCCCCGAACATCTTGATAAAGAACAATAAA 260
| |||||||||| |||| | ||| |||| || ||||||||||||||||| ||||||||
Sbjct 121 TTTGCACTGGTACGATCACGAGAGAGTTCACCCGCGAACATCTTGATAAAG-ACAATAAA 179
Query 261 AGCAGGGAGTTAGCGATGACTGCTCAGGTTTCATCCGAGGCAAGCCACACCGACCATCTT 320
||||||||||||| |||||||||||||||||||||| | ||||||||| |||| |
Sbjct 180 AGCAGGGAGTTAGAGATGACTGCTCAGGTTTCATCCCAAGCAAGCCACGCCGAGGTGCAG 239
Query 321 CAAGCCGACATACTCGCCGAAGTCCGCAACCATATCGGCCACCTCACCCTCAACCGCCCC 380
|| | || | || || || ||||||||||||||||||||||||||||| || |||
Sbjct 240 CAGGACGCTGTCCTGGCAAGCGTGCGCAACCATATCGGCCACCTCACCCTCAATCGTCCC 299
Query 381 GCCGGCCTGAACGCCATTACCCTGGACATGGTCCG-CAGCCTGAGCCAC-CACCTGCAGG 438
|| ||| |||||||||| ||||||||||||||||| ||| | | || | || ||||||
Sbjct 300 GCTGGCTTGAACGCCATCACCCTGGACATGGTCCGCCAG--TTAACCGCGCATTTGCAGG 357
Query 439 CCTGGGCCGACGATCCCACGGTGTATGCCGTGGTCCTGCGCGGCGCCGGGGAAAAAGCC 497
|||||||||||||| || ||| ||||||||||| |||||||||||||| || ||||||
Sbjct 358 CCTGGGCCGACGATGCCGAGGTCTATGCCGTGGTACTGCGCGGCGCCGGTGAGAAAGCC 416
>seq3412
Length=714
Score = 156 bits (172), Expect = 1e-35
Identities = 169/224 (75%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 338 CGAAGTCCGCAACCATATCGGCCACCTCACCCTCAACCGCCCCGCCGGCCTGAACGCCAT 397
||| || |||||||| ||||||||||| |||||||||||||| || |||||||| |
Sbjct 385 CGAGGTTCGCAACCAGATCGGCCACCTGCGTCTCAACCGCCCCGCTGGGTTGAACGCCCT 444
Query 398 TACCCTGGACATGGTCCGCAGCCTGAGCCACCACCTGCAGGCCTGGGCCGACGATCCCAC 457
||| |||||||||| |||||| || || | |||||| | || ||||||| ||||| |
Sbjct 445 GACCTTGGACATGGTGCGCAGCTTGCGCAAGCACCTGGACGCGTGGGCCGGTGATCCGAA 504
Query 458 GGTGTATGCCGTGGTCCTGCGCGGCGCCGGGGAAAAAGCCTTCTGCGCGGGCGGCGATAT 517
| ||||| || |||||||||| ||| || | ||||||||| || || || ||
Sbjct 505 CATCCGCGCCGTCGTACTGCGCGGCGAAGGGCCGAAGGGCTTCTGCGCCGGTGGTGACAT 564
Query 518 CCGTTCCTTGCATGACAGTTTCAAGAGCGGCGACACCCTGCACG 561
||| || |||||||||| | ||| ||| ||| ||||||||
Sbjct 565 CCGCTCGCTGCATGACAGCTACAAAGCCGGTGACGACCTGCACG 608
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1740265348096
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |