Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= AAMG01001262.1 Length=237 Score E Sequences producing significant alignments: (Bits) Value seq3220 217 2e-54 >seq3220 Length=4566 Score = 217 bits (240), Expect = 2e-54 Identities = 180/213 (85%), Gaps = 5/213 (2%) Strand=Plus/Minus Query 24 TCGAGATCCAGGAACGCGGCGGTCTTGCCGGTGCCGGTCTGGGCGCGGCCGAATGGCGTC 83 |||||||| ||||||||||| ||||||||||| ||||||||||| | ||||| | ||||| Sbjct 230 TCGAGATC-AGGAACGCGGCCGTCTTGCCGGTACCGGTCTGGGCCCTGCCGA-TCGCGTC 173 Query 84 TTTTGCCGGCCAGGGTGAAACCCAGCACCTAGCGCCTTGGATCGGCGTGCAGTACGGGAA 143 | || || || ||||| |||||||||| |||||| |||||||||||||||| ||||| Sbjct 172 CTGGCCCCGC-AGCGTGAAGCCCAGCACCT-GCGCCT-GGATCGGCGTGCAGTAGGGGAA 116 Query 144 ACCCAGGTCCTGGATGGCGTGCATCAGTTCCGGGGCCAGTTTGAAATCGTGGAAGCGGGT 203 ||||| || || |||||||||||||| || | || || ||||| |||||||| ||||| Sbjct 115 CCCCAGATCGTGAATGGCGTGCATCAGCTCAGAGGAGAGCTTGAAGTCGTGGAAACGGGT 56 Query 204 CTTGCCTTCCTGGGGCTCGACGACGAAGTCTTC 236 |||||| |||||||||||||| |||||||| || Sbjct 55 CTTGCCCTCCTGGGGCTCGACCACGAAGTCCTC 23 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 659003866782