Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq487 419 6e-115 >seq487 Length=3340 Score = 419 bits (464), Expect = 6e-115 Identities = 346/411 (84%), Gaps = 13/411 (3%) Strand=Plus/Minus Query 10 CACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTA 69 ||||| |||| || | ||||| |||| | || ||||||| |||||||| | |||| Sbjct 1127 CACAGCTCATCCCCGT--CTTTTGCAACAGACGTGGGTTCGGGCCTCCAGTACCT-GTTA 1071 Query 70 CCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCG 129 | ||||| || |||| |||| | |||||| |||||||| |||||||| | ||| ||| Sbjct 1070 CGGCACCTT-CACCCTGGCCAT-GACTAGATCACCCGGTTT-CGGGTCTACTGCCC-GCG 1015 Query 130 ACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAGCTTTGC 189 |||| |||||| | ||||||| ||| | || |||||||||||| ||||||||||| || Sbjct 1014 ACTATGCGCCCTTATCAGACTCGGTTTCC-CTTCGCCTCCCCTATACGGTTAAGCTT-GC 957 Query 190 CACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGG 249 ||| | | |||||||||||||||||||||||||||||||||||||| | || Sbjct 956 CACGAACAGTAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACTCTTTCGAG---- 901 Query 250 CTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCT 309 |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 900 CTCCTACTGCTTGTACGCACACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCT 841 Query 310 TTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGG 369 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct 840 TTTCGCCTTTCCCTCACGGTACTGGTTCACTATCGGTCGGTCAGTAGTATTTAGCCTTGG 781 Query 370 AGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 |||||||||||||||| |||||||| ||||| ||||| ||| |||||||| Sbjct 780 AGGATGGTCCCCCCATGTTCAGACAGGGTTTCACGTGCCCCGCCCTACTCG 730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241218667392