Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= AAMG01001291.1
Length=420
Score E
Sequences producing significant alignments: (Bits) Value
seq487 419 6e-115
>seq487
Length=3340
Score = 419 bits (464), Expect = 6e-115
Identities = 346/411 (84%), Gaps = 13/411 (3%)
Strand=Plus/Minus
Query 10 CACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTA 69
||||| |||| || | ||||| |||| | || ||||||| |||||||| | ||||
Sbjct 1127 CACAGCTCATCCCCGT--CTTTTGCAACAGACGTGGGTTCGGGCCTCCAGTACCT-GTTA 1071
Query 70 CCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCG 129
| ||||| || |||| |||| | |||||| |||||||| |||||||| | ||| |||
Sbjct 1070 CGGCACCTT-CACCCTGGCCAT-GACTAGATCACCCGGTTT-CGGGTCTACTGCCC-GCG 1015
Query 130 ACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAGCTTTGC 189
|||| |||||| | ||||||| ||| | || |||||||||||| ||||||||||| ||
Sbjct 1014 ACTATGCGCCCTTATCAGACTCGGTTTCC-CTTCGCCTCCCCTATACGGTTAAGCTT-GC 957
Query 190 CACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGG 249
||| | | |||||||||||||||||||||||||||||||||||||| | ||
Sbjct 956 CACGAACAGTAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACTCTTTCGAG---- 901
Query 250 CTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCT 309
|||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 900 CTCCTACTGCTTGTACGCACACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCT 841
Query 310 TTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGG 369
||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 840 TTTCGCCTTTCCCTCACGGTACTGGTTCACTATCGGTCGGTCAGTAGTATTTAGCCTTGG 781
Query 370 AGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420
|||||||||||||||| |||||||| ||||| ||||| ||| ||||||||
Sbjct 780 AGGATGGTCCCCCCATGTTCAGACAGGGTTTCACGTGCCCCGCCCTACTCG 730
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1241218667392
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |