Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= AAMG01001353.1 Length=424 Score E Sequences producing significant alignments: (Bits) Value seq24138 95.1 3e-17 seq11550 84.2 5e-14 >seq24138 Length=666 Score = 95.1 bits (104), Expect = 3e-17 Identities = 58/62 (94%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 363 CAATCCGATTTTCATCCAGCAGGGCGCGGTGTGGACGTCTGCTGGCGTGACCGCCGGGAT 422 ||||||||||||||||||||| || ||||||||||||||||| ||||||||||| ||||| Sbjct 1 CAATCCGATTTTCATCCAGCAAGGTGCGGTGTGGACGTCTGCCGGCGTGACCGCTGGGAT 60 Query 423 CG 424 || Sbjct 61 CG 62 >seq11550 Length=473 Score = 84.2 bits (92), Expect = 5e-14 Identities = 79/94 (84%), Gaps = 5/94 (5%) Strand=Plus/Plus Query 1 GCGCGCCAACGCGGTTTGCCATTCGCCCTACGCGGTTCAACGTCATTCGCTCACTCAGGC 60 |||||||| | ||||||||||| ||||||||||| ||||||||| |||| | ||||||| Sbjct 380 GCGCGCCAGCATGGTTTGCCATT-GCCCTACGCGG-TCAACGTCA-TCGC-CGCTCAGGC 435 Query 61 CGGGCCGGTAACGACGTTCGGCCGGCCCGGCGCT 94 | |||||| | |||| || ||||||| |||||| Sbjct 436 TGAGCCGGTGATGACG-TCAGCCGGCCTGGCGCT 468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1254014736128