Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= AAMG01001383.1 Length=561 Score E Sequences producing significant alignments: (Bits) Value seq30683 423 6e-116 seq27202 174 5e-41 >seq30683 Length=505 Score = 423 bits (468), Expect = 6e-116 Identities = 287/321 (89%), Gaps = 1/321 (0%) Strand=Plus/Plus Query 242 AGCGGGAGGGAGCCTTGAAATAACAGAATAGAGAACAGCAGCAGGAAGCCGGCGAGGTTG 301 || || |||||||| || |||||||| || ||||||| || || |||||| || |||||| Sbjct 1 AGTGGCAGGGAGCCCTGGAATAACAGGATCGAGAACAACAACAAGAAGCCCGCCAGGTTG 60 Query 302 AATGCGAGCAAGGCCAGCATGTACTTCTGCCAGCTTTGTTCCTGCTGTGCGTCCACACCC 361 ||||||||||||||||||||||| ||||||||||| || |||||||| || ||||| ||| Sbjct 61 AATGCGAGCAAGGCCAGCATGTATTTCTGCCAGCTCTGCTCCTGCTGCGCATCCACGCCC 120 Query 362 GACAGGCGATAACAGGCGCTTTCCACCGGCCCCAGCACCGGGCTGAGCCAGGTGCGCTGG 421 || |||||||||||||| | || || |||||||| |||||| |||| || ||||||||| Sbjct 121 GAGAGGCGATAACAGGCTTTCTCGACAGGCCCCAGTACCGGGGTGAGGCAAGTGCGCTGG 180 Query 422 CCCTCCATCACCTTGTAGTAGAACCGCCCCAGGAACGGAGTCGGCACCAGTACCACGGCA 481 || |||||||||||||||||||||||||||| || || | ||||||||||||||||||| Sbjct 181 CCTTCCATCACCTTGTAGTAGAACCGCCCCAAAAAGGGTGCCGGCACCAGTACCACGGCA 240 Query 482 AAGAAGGCGATGATCAGCCAATAGTCATAACTGTGCATAG-CCGCTCCTAGTTCCGATCC 540 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 241 AAGAAGGCGATGATCAGCCAATAGTCATAACTGTGCATAGCCCGCTCCTAGTTCCGATCC 300 Query 541 GCGCGTAACAGCGCAACCAGC 561 ||||||||||||||||||||| Sbjct 301 GCGCGTAACAGCGCAACCAGC 321 >seq27202 Length=4422 Score = 174 bits (192), Expect = 5e-41 Identities = 296/429 (69%), Gaps = 0/429 (0%) Strand=Plus/Plus Query 61 TACCATCACGGACAGGACTGTCGCGTTGTTGACGAAGTTCTGCTCCGTGAGGACGGCCAT 120 ||||| ||||| |||| | || || |||| ||||||||| | || ||| || ||| Sbjct 3429 TACCAGCACGGCCAGGCCCGTGGCAGCACTGACAAAGTTCTGCACGGTCAGGCCGAGCAT 3488 Query 121 CTGACTTAGATAATTTAAGGACGCCTCACCGCTGTTGTTCTGCCAGTTGGTATTGGTCAT 180 ||| | || || | | ||| ||||| || |||| | |||||||||||| ||||||| Sbjct 3489 CTGGTTCAGGTAGCTGATGGAGGCCTCGCCACTGTAGGCCTGCCAGTTGGTGTTGGTCAC 3548 Query 181 GAAACTGACGGCGGTATTAAACGCCTAGGTCCATTCCTGGCCCGGCAGGTTTTGCGGGTT 240 ||||||||| ||||| || || ||| | ||| || | || || | | ||||| || Sbjct 3549 GAAACTGACCGCGGTGTTGAAGGCCAGCGACCACTCAAGACCGGGTAAGCGCTGCGGATT 3608 Query 241 CAGCGGGAGGGAGCCTTGAAATAACAGAATAGAGAACAGCAGCAGGAAGCCGGCGAGGTT 300 || ||| || |||||| ||||| ||||||||| ||||| || | | || Sbjct 3609 CAACGGCAGAAGGCCTTGGCCCAACAGCGCGCCGAACAGCAGGAGGAACCCAACCAAATT 3668 Query 301 GAATGCGAGCAAGGCCAGCATGTACTTCTGCCAGCTTTGTTCCTGCTGTGCGTCCACACC 360 ||| |||| ||||| || | |||||| |||| |||| || | | || Sbjct 3669 GAAGATCAGCAGCGCCAGGGCATAGTGGCGCCAGCCCTGTTGCTGCGATGGGCAAATCCC 3728 Query 361 CGACAGGCGATAACAGGCGCTTTCCACCGGCCCCAGCACCGGGCTGAGCCAGGTGCGCTG 420 | ||| || || ||||| |||| | ||| ||||| | || | ||||| |||||| | Sbjct 3729 AGCCAGCCGGTAGCAGGCATTTTCGATCGGTCCCAGTAATGGCGTAAGCCACGTGCGCCG 3788 Query 421 GCCCTCCATCACCTTGTAGTAGAACCGCCCCAGGAACGGAGTCGGCACCAGTACCACGGC 480 ||||||||| || ||| ||||||||| ||||| | || | ||| | ||| || | ||| Sbjct 3789 GCCCTCCATGACATTGAAGTAGAACCTTCCCAGCCAAGGGGCCGGTAGCAGGACTATGGC 3848 Query 481 AAAGAAGGC 489 |||||||| Sbjct 3849 GAAGAAGGC 3857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1692280090336