Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= AAMG01001429.1 Length=150 Score E Sequences producing significant alignments: (Bits) Value seq30499 104 2e-20 seq21599 73.4 3e-11 >seq30499 Length=2148 Score = 104 bits (114), Expect = 2e-20 Identities = 107/139 (77%), Gaps = 11/139 (8%) Strand=Plus/Minus Query 22 ACCGAGGTGAAGCCATCGCAGGCAAGCCAGCTCCCACATTTGCTTTTCCCATGGTTCAAG 81 |||| |||| || |||||||||||||||||||||||||||| ||| || || ||| Sbjct 2144 ACCGCAGTGATGCTATCGCAGGCAAGCCAGCTCCCACATTTGACCTTCACACCGTCCAAT 2085 Query 82 CCCCTC--GCCCTC--------CTTGCCAACAACCTTTTTCCAACCGGAACAAGCTGCTT 131 | | | || | ||| || ||| |||||||||||||||||||||||| || Sbjct 2084 AGCTTGCAGTCCGCAAAATGGCCTTCCCGACAGCCTTTTTCCAACCGGAACAAGCTG-TT 2026 Query 132 ACTGTACCGATCATAAAGC 150 ||||||||||||||||||| Sbjct 2025 ACTGTACCGATCATAAAGC 2007 >seq21599 Length=1525 Score = 73.4 bits (80), Expect = 3e-11 Identities = 52/60 (87%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 2 CGACTCGGAGCTTCATATATACCGAGGTGAAGCCATCGCAGGCAAGCCAGCTCCCACATT 61 |||||||| ||||| | |||||||||| || |||||||||||||||||||||||||| Sbjct 837 CGACTCGGTCCTTCAGTTGAACCGAGGTGATGCTATCGCAGGCAAGCCAGCTCCCACATT 896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 383889433200