Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= AAMG01001435.1 Length=587 Score E Sequences producing significant alignments: (Bits) Value seq12464 365 2e-98 seq12247 145 3e-32 >seq12464 Length=10292 Score = 365 bits (404), Expect = 2e-98 Identities = 351/445 (79%), Gaps = 4/445 (1%) Strand=Plus/Minus Query 1 TCGATGTACGGCGGTGGTTTTGCCACGGTTCCGGCTTACCTGGCCGACCTGTTCGGTACG 60 |||||||| |||||||| || ||||||| || || |||||||||||||||||||| || Sbjct 9839 TCGATGTATGGCGGTGGCTTCTCCACGGTACCCGCCTACCTGGCCGACCTGTTCGGCACA 9780 Query 61 CAGATGGTCGGTGCGATCCACGGTCGCCTGCTGACCGCCTGGGCAGCGGCGGGCGTCTTG 120 |||||||| || || |||||||| || ||| |||| |||||||| || || || || || Sbjct 9779 CAGATGGTTGGCGCCATCCACGGGCGTCTGTTGACAGCCTGGGCGGCCGCCGGGGTGCTG 9720 Query 121 GGCCCGGTGTTGGTGAACTATCTGCGTGAGTATCAGTTGAGCATC-GGCGTTGAACGCGC 179 || || |||||| | | ||| ||||| || | ||| ||| || | ||||||||||| || Sbjct 9719 GGGCCTGTGTTGATCACCTACCTGCGCGAATCTCAATTG-GCGGCTGGCGTTGAACGTGC 9661 Query 180 TGCGGCCTATGACATCACCTTGTACATCCTCGCTGGCCTGCTGGTGCTGGGGTTCATCTG 239 || || || ||||| ||| ||||||||||||| |||||| |||||||||| |||||||| Sbjct 9660 GGCAGCGTACGACATGACCCTGTACATCCTCGCCGGCCTGTTGGTGCTGGGCTTCATCTG 9601 Query 240 CAACCTGCTGGTGCGTCCGGTGGCCGACAAGTACTTCATGACCGACGCCGAACTGGCCGC 299 |||| ||||| | || |||||||||||||||||||||||| |||| || |||||||||| Sbjct 9600 CAACGTGCTGATCCGCCCGGTGGCCGACAAGTACTTCATGTCCGATGCGCAACTGGCCGC 9541 Query 300 CGAGCAAGCGCTGGGGCATGACAAAGGCGCCGACGCCAGCACG-TCCCTGGAGTGGAAAG 358 ||| | ||| || | || ||||| ||||| |||| | || || ||||| |||||||| | Sbjct 9540 CGAACGTGCGTTGAGCCACGACAAGGGCGCTGACGGC-GCGCGGTCCCTCGAGTGGAAGG 9482 Query 359 CCGCGCCAGGTACTGTGCCATTGGCGATTGCCGCCTGGCTGGTGGTGGGTATTCCGTTGG 418 | ||||| || |||| ||| | | | | |||| ||||||| | ||||||| Sbjct 9481 CTGCGCCTGGCCGCCTGCCGCTGGTGCTGGTGGGCTGGGCCGTGGTGGTGGTGCCGTTGG 9422 Query 419 CGTGGGGTGTGTGGGTGACCCTGCA 443 | ||||| || |||||||||||||| Sbjct 9421 CCTGGGGCGTCTGGGTGACCCTGCA 9397 >seq12247 Length=307 Score = 145 bits (160), Expect = 3e-32 Identities = 92/100 (92%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 1 TCGATGTACGGCGGTGGTTTTGCCACGGTTCCGGCTTACCTGGCCGACCTGTTCGGTACG 60 ||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||| || Sbjct 208 TCGATGTACGGCGGTGGTTTTGCCACGGTTCCGGCCTACCTGGCGGACTTGTTCGGCACT 267 Query 61 CAGATGGTCGGTGCGATCCACGGTCGCCTGCTGACCGCCT 100 |||||||| || |||||||||||||||||| ||||||||| Sbjct 268 CAGATGGTTGGCGCGATCCACGGTCGCCTGTTGACCGCCT 307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1775454537120