Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= AAMG01001436.1 Length=198 Score E Sequences producing significant alignments: (Bits) Value seq13964 289 3e-76 seq4249 190 2e-46 >seq13964 Length=426 Score = 289 bits (320), Expect = 3e-76 Identities = 166/170 (98%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 29 GCCGGCGTTGTTGATCGCCAGCTCCGCCAGGGCCAGGCCCAGTTCCGGATGCTCGTTGAG 88 |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct 426 GCCGGCGTTGTTGATCGCCAGCTCCGCCAGGGCCAGGCCCAGCTCGGGATGCTCGTTGAG 367 Query 89 CCACAGGCTGAAGGCGTCCTTGACCACGCCAGAGACAAACGCCGCTGCCTCGCGGGACGA 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 366 CCACAGGCTGAAGGCGTCCTTGACCACGCCAGAGACAAACGCCGCTGCCTCGCGGGACGA 307 Query 149 CAGGCGCTCCTTGGTCTGCCCGGAGAATTGCGGTTCCTGCATCTTCATCG 198 |||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct 306 CAGGCGCTCCTTGGTCTGGCCGGAAAATTGCGGTTCCTGCATCTTCATCG 257 >seq4249 Length=2460 Score = 190 bits (210), Expect = 2e-46 Identities = 161/198 (81%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 1 CGACCTTTTTGCTCGCCTTCAAGCGCCGGCCGGCGTTGTTGATCGCCAGCTCCGCCAGGG 60 ||||||| ||||| || |||| ||| || |||||||| |||| |||| ||| |||| Sbjct 1084 CGACCTTCTTGCTGGCTTTCAGGCGGCGCCCGGCGTTACTGATGGCCAACTCGGCCAACT 1143 Query 61 CCAGGCCCAGTTCCGGATGCTCGTTGAGCCACAGGCTGAAGGCGTCCTTGACCACGCCAG 120 || |||||| ||||| || |||||||||||||||| ||||| |||||||||||||| | Sbjct 1144 GCATGCCCAGCTCCGGGTGGGCGTTGAGCCACAGGCTAAAGGCATCCTTGACCACGCCTG 1203 Query 121 AGACAAACGCCGCTGCCTCGCGGGACGACAGGCGCTCCTTGGTCTGCCCGGAGAATTGCG 180 | || || || || || || || || || ||||||||||||||||||||||| || || | Sbjct 1204 AAACGAAGGCGGCGGCTTCACGCGAGGAAAGGCGCTCCTTGGTCTGCCCGGAAAACTGTG 1263 Query 181 GTTCCTGCATCTTCATCG 198 | |||||||||||||||| Sbjct 1264 GGTCCTGCATCTTCATCG 1281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 534240998799