Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= AAMG01001436.1
Length=198
Score E
Sequences producing significant alignments: (Bits) Value
seq13964 289 3e-76
seq4249 190 2e-46
>seq13964
Length=426
Score = 289 bits (320), Expect = 3e-76
Identities = 166/170 (98%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 29 GCCGGCGTTGTTGATCGCCAGCTCCGCCAGGGCCAGGCCCAGTTCCGGATGCTCGTTGAG 88
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 426 GCCGGCGTTGTTGATCGCCAGCTCCGCCAGGGCCAGGCCCAGCTCGGGATGCTCGTTGAG 367
Query 89 CCACAGGCTGAAGGCGTCCTTGACCACGCCAGAGACAAACGCCGCTGCCTCGCGGGACGA 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 366 CCACAGGCTGAAGGCGTCCTTGACCACGCCAGAGACAAACGCCGCTGCCTCGCGGGACGA 307
Query 149 CAGGCGCTCCTTGGTCTGCCCGGAGAATTGCGGTTCCTGCATCTTCATCG 198
|||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct 306 CAGGCGCTCCTTGGTCTGGCCGGAAAATTGCGGTTCCTGCATCTTCATCG 257
>seq4249
Length=2460
Score = 190 bits (210), Expect = 2e-46
Identities = 161/198 (81%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 1 CGACCTTTTTGCTCGCCTTCAAGCGCCGGCCGGCGTTGTTGATCGCCAGCTCCGCCAGGG 60
||||||| ||||| || |||| ||| || |||||||| |||| |||| ||| ||||
Sbjct 1084 CGACCTTCTTGCTGGCTTTCAGGCGGCGCCCGGCGTTACTGATGGCCAACTCGGCCAACT 1143
Query 61 CCAGGCCCAGTTCCGGATGCTCGTTGAGCCACAGGCTGAAGGCGTCCTTGACCACGCCAG 120
|| |||||| ||||| || |||||||||||||||| ||||| |||||||||||||| |
Sbjct 1144 GCATGCCCAGCTCCGGGTGGGCGTTGAGCCACAGGCTAAAGGCATCCTTGACCACGCCTG 1203
Query 121 AGACAAACGCCGCTGCCTCGCGGGACGACAGGCGCTCCTTGGTCTGCCCGGAGAATTGCG 180
| || || || || || || || || || ||||||||||||||||||||||| || || |
Sbjct 1204 AAACGAAGGCGGCGGCTTCACGCGAGGAAAGGCGCTCCTTGGTCTGCCCGGAAAACTGTG 1263
Query 181 GTTCCTGCATCTTCATCG 198
| ||||||||||||||||
Sbjct 1264 GGTCCTGCATCTTCATCG 1281
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 534240998799
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |