Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= AAMG01001449.1 Length=395 Score E Sequences producing significant alignments: (Bits) Value seq29624 345 1e-92 seq6822 224 2e-56 >seq29624 Length=14981 Score = 345 bits (382), Expect = 1e-92 Identities = 310/390 (79%), Gaps = 12/390 (3%) Strand=Plus/Plus Query 1 CGACGGCACCGGCACGGTGTGGAAGGGCGGCCTGTTCCCGTTCCTGTTCATCACCATTGC 60 ||| ||||||||| |||| ||||||||| |||||||||||||||||||||||||| || Sbjct 12563 CGATGGCACCGGCCCGGTCTGGAAGGGCACGCTGTTCCCGTTCCTGTTCATCACCATCGC 12622 Query 61 CTGTGGCGCGGTCTCGGGTTTCCATGCGCTGATCTCCTCGGGCACCACGCCCAAGTTGCT 120 ||||||||||| ||||| |||||||| |||||||| |||||||||||||||||| |||| Sbjct 12623 TTGTGGCGCGGTATCGGGGTTCCATGCCCTGATCTCGTCGGGCACCACGCCCAAGCTGCT 12682 Query 121 CGCCAGTGAGAGCCATGCCCGTTACATCGGTTACGGCGGCATGCTGATGGAGTCGTTCGT 180 | | || | | | ||||| |||||||| ||||| |||||||||||||| |||||||| Sbjct 12683 GGATAACGAAACCAACGCCCGCTACATCGGCTACGGTGGCATGCTGATGGAATCGTTCGT 12742 Query 181 GGCCATCATGGCGATGGTTGCCGCCTCGGTGATTGAGCCCGGCGTGTACTTCGCCATGAA 240 ||| |||||||| ||||| || || |||||||| ||||| |||||||| ||||||||||| Sbjct 12743 GGCGATCATGGCCATGGTCGCGGCTTCGGTGATCGAGCCGGGCGTGTATTTCGCCATGAA 12802 Query 241 CAGCCCGGCTGCCATTGTCGGCACCGACGTGGTCACCGTGGCGCAAACCGTCAGCAGTTG 300 ||||||||||||| | || || | ||| || || | |||||||| || Sbjct 12803 CAGCCCGGCTGCCGTGGTAGGTGCAGACACGG-----GT-------TCGGTCAGCAGCTG 12850 Query 301 GGGCTTTGCCATTACGCCTGAGGCGCTGTCGGCCGTTGCCCACAATATCGGTGAAACCAC 360 |||||| |||||||||||| ||| ||| ||||||| | || || || ||| Sbjct 12851 GGGCTTCTTGATTACGCCTGAGCAGCTTGAGGCGGTTGCCCGTGACATTGGCGAGCACAC 12910 Query 361 CATCCTGGCACGTGCCGGCGGCGCGCCGAC 390 ||| ||||| || |||||||| |||||||| Sbjct 12911 CATTCTGGCCCGCGCCGGCGGTGCGCCGAC 12940 >seq6822 Length=1694 Score = 224 bits (248), Expect = 2e-56 Identities = 133/139 (96%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 1 CGACGGCACCGGCACGGTGTGGAAGGGCGGCCTGTTCCCGTTCCTGTTCATCACCATTGC 60 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 139 CGACGGCACCGGCCCGGTGTGGAAGGGCGGCCTGTTCCCGTTCCTGTTCATCACCATTGC 80 Query 61 CTGTGGCGCGGTCTCGGGTTTCCATGCGCTGATCTCCTCGGGCACCACGCCCAAGTTGCT 120 |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct 79 CTGTGGCGCGGTCTCGGGCTTCCATGCGCTGATCTCCTCGGGCACCACGCCCAAGCTGCT 20 Query 121 CGCCAGTGAGAGCCATGCC 139 |||||||| ||||| ||| Sbjct 19 GGCCAGTGAAAGCCACGCC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1161243237792