Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= AAMG01001545.1 Length=359 Score E Sequences producing significant alignments: (Bits) Value seq8134 471 9e-131 seq27025 315 1e-83 >seq8134 Length=1610 Score = 471 bits (522), Expect = 9e-131 Identities = 320/359 (89%), Gaps = 0/359 (0%) Strand=Plus/Plus Query 1 CGAAGTTCGGCACCTGGCGCAGCGCCGGCAGGATGTTCACGTTCGGCGAAGCCTTGGAAT 60 ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| | Sbjct 207 CGAAGTTGGGCACCTGGCGCAAGGCCGGCAGGATGTTCACGTTCGGCGAAGCCTTGGAGT 266 Query 61 ACATGTAGCACACGTAACCGCTGCAAAAACCGCAGAAGTTGCACGGGCCCATCTGCGCGC 120 |||||||||||||||| || |||||||| ||||||||||||||||||||||||||||| | Sbjct 267 ACATGTAGCACACGTAGCCACTGCAAAACCCGCAGAAGTTGCACGGGCCCATCTGCGCAC 326 Query 121 CATAGGGGTTGGTGTACGGCCCCGAGGTATTGGCCGACGGCAGGTTGTAGGGTTTGTAAC 180 | ||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||| Sbjct 327 CGTAGGGGTTGGTGTACGGCCCCGACGTATTGGCCGAAGGCAGGTTGTAAGGTTTGTAAC 386 Query 181 CGACCTCGGCAGCGGCTTTCTGAAACAGCTGTGCGGAGACGGTGTTTTTCTGCGATTCCA 240 | || |||| || ||||||||||||||||| ||||||||||| |||||||||| |||| Sbjct 387 CTACGTCGGTCGCCGCTTTCTGAAACAGCTGGGCGGAGACGGTATTTTTCTGCGCCTCCA 446 Query 241 AGGGGAACGGGTTGGAGCGGTCCGGGGCATACGGGTTGCCACCGCGACCTTCGCCCACCA 300 ||||||||||||||||| ||||| || || |||||||| || || ||||| || |||| Sbjct 447 GCGGGAACGGGTTGGAGCGATCCGGCGCGTAGGGGTTGCCGCCACGGCCTTCACCGACCA 506 Query 301 ACTGGCCTTTGACGGTCCAGGCCTGGCCGGAGGTGCCGAAGACTTTTTCCGCGTAGTCG 359 ||||| ||||| |||||||| |||||||||||||| |||||||||||||| |||||| Sbjct 507 GTTGGCCCTTGACCGTCCAGGCTTGGCCGGAGGTGCCAAAGACTTTTTCCGCATAGTCG 565 >seq27025 Length=9099 Score = 315 bits (348), Expect = 1e-83 Identities = 285/359 (79%), Gaps = 0/359 (0%) Strand=Plus/Plus Query 1 CGAAGTTCGGCACCTGGCGCAGCGCCGGCAGGATGTTCACGTTCGGCGAAGCCTTGGAAT 60 |||||| | ||||||||||||||| ||||||||||| ||||||||||| |||||||| | Sbjct 4622 CGAAGTGCTCCACCTGGCGCAGCGCGGGCAGGATGTTTACGTTCGGCGATGCCTTGGAGT 4681 Query 61 ACATGTAGCACACGTAACCGCTGCAAAAACCGCAGAAGTTGCACGGGCCCATCTGCGCGC 120 |||||||||||||||| ||||||||||| |||||||| |||||||| |||||||| |||| Sbjct 4682 ACATGTAGCACACGTAGCCGCTGCAAAATCCGCAGAAATTGCACGGTCCCATCTGAGCGC 4741 Query 121 CATAGGGGTTGGTGTACGGCCCCGAGGTATTGGCCGACGGCAGGTTGTAGGGTTTGTAAC 180 |||| ||||||||||| || || || || |||||||| ||||||||||| || | || | Sbjct 4742 CATACGGGTTGGTGTAAGGGCCGGATGTGTTGGCCGAGGGCAGGTTGTAAGGGTGATAGC 4801 Query 181 CGACCTCGGCAGCGGCTTTCTGAAACAGCTGTGCGGAGACGGTGTTTTTCTGCGATTCCA 240 | | | | | ||| ||||| || | ||| || || || ||| |||||||| || Sbjct 4802 CCAACGACGAGGTGGCCTTCTGGAAAACCTGAGCCGACACCACGTTCTTCTGCGAGGGCA 4861 Query 241 AGGGGAACGGGTTGGAGCGGTCCGGGGCATACGGGTTGCCACCGCGACCTTCGCCCACCA 300 |||||||| ||||| |||||||||||| |||| ||||| || || | || |||| Sbjct 4862 GCGGGAACGGATTGGAACGGTCCGGGGCAAACGGATTGCCGCCTTTGCCCTGCCCGACCA 4921 Query 301 ACTGGCCTTTGACGGTCCAGGCCTGGCCGGAGGTGCCGAAGACTTTTTCCGCGTAGTCG 359 | || ||||| ||||||||||| || ||||||||||| || || || ||| ||||| Sbjct 4922 GTTCACCCTTGACCGTCCAGGCCTGCCCCGAGGTGCCGAACACCTTCTCGGCGAAGTCG 4980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046078619168