Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= AAMG01001569.1
Length=509
Score E
Sequences producing significant alignments: (Bits) Value
seq17717 300 5e-79
seq29885 201 3e-49
>seq17717
Length=4727
Score = 300 bits (332), Expect = 5e-79
Identities = 325/425 (76%), Gaps = 12/425 (3%)
Strand=Plus/Minus
Query 2 GACGGTCGTCCGTCGCCGACCCTGGGCTCGCGTGGCGGCCTGTACCCGGAGACC-GCACT 60
||||| | || || ||| | |||||| | || || ||| |||||||||| ||| ||||
Sbjct 3087 GACGGCAGGCCTTCACCGTCGCTGGGCACCCGCGGTGGCATGTACCCGGAAACCAGCACC 3028
Query 61 GATTTCGGTGACCGGCCAGGATGTGCTGCCCAAGTTGCAGGCCCAGGCTGAAGCTGCTGT 120
|| || | |||| | | ||| |||||||| ||||||||||||| || ||||| ||
Sbjct 3027 -ATCAGTGTCAGCGGCAACCAGGTGGTGCCCAAGCTGCAGGCCCAGGCCGAGGCTGCCGT 2969
Query 121 GCGTTTGTTGGGCTTTACGCCGACCAACTC--GCCAGGCGTACCACAACTGACCGTGACC 178
||| || ||||||| ||||| |||| | | || | ||| || || ||||||| |||
Sbjct 2968 GCGCCTGCTGGGCTTCACGCCCACCACCGCAGGCAACGCG--CCCCAGTTGACCGTTACC 2911
Query 179 CTGGCCGAGCTTAAATACCAGTCGCCCAAAGACGGCCTGTATGTGACCGAGGCTTCCATC 238
||||||||||| || |||||||||||||| ||| ||||| |||||||| || ||||
Sbjct 2910 CTGGCCGAGCTGAAGTACCAGTCGCCCAAGGACAAGCTGTACGTGACCGAAGCCACCATT 2851
Query 239 GGCGCCACCTTCAAGTCTGACGTCAGTGCCGGCACC---CGCCGTTACAGTGGCCGCTAC 295
||||| |||||| |||||||| ||| || | ||||| |||| || |||||
Sbjct 2850 GGCGCTACCTTCCGTGCTGACGTC---GCCAACAACGGCCGCCGCTACACCGGTCGCTAT 2794
Query 296 GCCGCCTCGCTCAACCAGCGTTTCGGCATGTCGCCCAACCAGGAAACCAACACCAAGCTG 355
| ||| ||||| | ||||| || |||||| |||| |||||||| ||||||||| || ||
Sbjct 2793 GGCGCTTCGCTGGATCAGCGCTTTGGCATGGCGCCAAACCAGGACACCAACACCCAGTTG 2734
Query 356 GTCAGCGACGTGCTCAGCGATGCCCTGACCCGCCTGTTCAAGGACCCAAGCATCGGCCAA 415
|||||||| ||| | ||||| || |||||||| |||||||||||||||||||||| ||
Sbjct 2733 GTCAGCGATGTGTTGAGCGACGCACTGACCCGGTTGTTCAAGGACCCAAGCATCGGTCAG 2674
Query 416 CTGCT 420
||||
Sbjct 2673 GTGCT 2669
>seq29885
Length=1077
Score = 201 bits (222), Expect = 3e-49
Identities = 127/135 (94%), Gaps = 2/135 (1%)
Strand=Plus/Minus
Query 376 TGCCCTGACCCGCCTGTTCAAGGACCCAAGCATCGGCCAACTGCTCAGCGCGCAATAAGC 435
|||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1077 TGCCTTGCCCCGCCTGTTCAAGGACCCAAGCATCGGTCAACTGCTCAGCGCGCAATAAGC 1018
Query 436 CGCTCACaaaaaaaCCGGGCTCATCGCTGAGCCCGGtttttttATGCCTGTGG-TTTTGT 494
||||||| ||||||||||||||||||||||||||||||||||| |||| |||| ||||||
Sbjct 1017 CGCTCAC-AAAAAACCGGGCTCATCGCTGAGCCCGGTTTTTTTGTGCCCGTGGTTTTTGT 959
Query 495 CATGCCGCCGTATCG 509
||||| |||||||||
Sbjct 958 CATGCGGCCGTATCG 944
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1525931196768
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |