Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= AAMG01001583.1 Length=657 Score E Sequences producing significant alignments: (Bits) Value seq29077 131 7e-28 >seq29077 Length=2076 Score = 131 bits (144), Expect = 7e-28 Identities = 298/443 (67%), Gaps = 4/443 (1%) Strand=Plus/Minus Query 79 TGAGTTTGTTCGCTCCTTCGGTATCAAGCACTTGGAGCCGACGGT-GCTGCCGGATGAGG 137 ||||||| | ||||| ||| |||| |||| | ||||| ||| || | | |||| Sbjct 1886 TGAGTTTTTCCGCTCATTCAAAATCACGCACCTTGAGCCTACGCCAGCGGTCA-ATGAAA 1828 Query 138 TTGAGCAGGTAATCCTTGAGCAGATTGCCAGTGAACCTGAGGCTTGGCTGGCAATTGTCC 197 | || || | |||| |||||||||||||||| ||| | ||| |||| | || | Sbjct 1827 TCGAAGAGCTGATCCACGAGCAGATTGCCAGTGCACCATCGAACTGGTTGGCGGTGGTGC 1768 Query 198 CCACGTCCCACAGTGATGCCCAGGCATTGCTTTACGACGCCCCGGT-GCTGGAGTTGAAA 256 |||| || || |||| ||| |||| |||| |||| || || | | ||||||| || || Sbjct 1767 CCACCACCTACCGTGACGCCATGGCACTGCTGTACG-CGGCCAGCTCGCTGGAGCTGCAA 1709 Query 257 CGTCAGACCCAGGCAGCCAGCCATTCCGGCAAAGCGCTGGATGAGTATCGCACCCGTCGG 316 | | | || || | ||| | ||| || | ||| ||||| | || Sbjct 1708 GGGCGGGTTCAAGCCGTCAGTAACTCCAGCTGGATGTTGGCGACTTATCGGGTTCAACGT 1649 Query 317 CTGGGCGAGCAGGGCGAGACACGCAGGCGCCGGTTGATCGCTTTTTTCTCTCCGTTATTC 376 || | |||||| ||||| | ||||||| ||||| | | | |||| |||||||||| Sbjct 1648 CTTGAAGAGCAGAGCGAGGCCACCAGGCGCGGGTTGCTGGGTATTTTGATTCCGTTATTC 1589 Query 377 GGGATGTTCAATGATGCCTACGAGTTGCTGCTTGTGGCGCGGCGCTTTCATCGCTATGGG 436 || | | || || | | || |||||| | | || || |||| |||||||| ||| Sbjct 1588 GGTAAGGCTAACGACTTCCATGATTTGCTGTTGGCTGCCCGACGCTATCATCGCTTTGGC 1529 Query 437 GACCCTCATGATGCCGTTGACGTGGGTTTTATGAGTGCGTTTATGGCGGCTGACCTGCTG 496 |||||| | |||||||| || |||| || |||| |||| |||||| || ||| | Sbjct 1528 GACCCTAACGATGCCGTGGATGTGGCGTTCATGACCCTGTTTCTGGCGGTCGAACTGGCG 1469 Query 497 ACAAACTTTATACCGGGGCCCAA 519 ||| ||||| ||| | ||||| Sbjct 1468 ACAGACTTTGCACCTGTTCCCAA 1446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1996167557904