Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= AAMG01001603.1 Length=479 Score E Sequences producing significant alignments: (Bits) Value seq24854 508 2e-141 >seq24854 Length=1724 Score = 508 bits (562), Expect = 2e-141 Identities = 400/478 (84%), Gaps = 1/478 (0%) Strand=Plus/Minus Query 1 CGAGGTAGTTGCCGCCGATGATGGCGACAAACGCCATGATGATGCCGATCAGGCTCAACA 60 ||||| |||| ||||| | |||||||||||| |||| ||| | ||| |||||||| | || Sbjct 1631 CGAGGAAGTTACCGCCCACGATGGCGACAAAAGCCAGGATCAGGCCAATCAGGCTGAGCA 1572 Query 61 CATCCATTAGAGGCAGGCCTCCACCAGATGCTTGCCGATGTCGTCCAGGCTGTAGATGGC 120 | ||||| ||| ||| ||||||||||| ||| ||| || ||||| |||||||| | || Sbjct 1571 CGTCCATCAGACGCACGCCTCCACCAGGTGCCGGCCAATATCGTCGAGGCTGTACACCGC 1512 Query 121 GTCGGCCAGGTCAGCCTTGACGATGGCCATGGGCATGCCATAGATCACGCAGCTGGCTTC 180 |||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct 1511 ATCGGCCAGGTTGGCCTTGACGATCGCCATGGGCATGCCATAAATCACGCAGCTGGCTTC 1452 Query 181 GTCCTGGGCCCAGATCACACTGCCGCCCTGCTTGAGCAGGCGCGCGCCTTCACGGCCGTC 240 ||||| ||||| | | ||||| |||||||||||||||||||| ||||| |||||||| Sbjct 1451 ATCCTGTGCCCACACCGTGCTGCCACCCTGCTTGAGCAGGCGCGCCCCTTCCCGGCCGTC 1392 Query 241 GGCGCCCATGCTCGGTGAGGACCACCGCCAGAACTTTGTCGCCGTAGGACTTGGCGGCCG 300 |||||||||| | || || ||||| | || || |||||||| ||||||||||| |||| Sbjct 1391 CGCGCCCATGC-CCGTCAGTACCACGGACAACACCTTGTCGCCATAGGACTTGGCTGCCG 1333 Query 301 AACCGAAGGTGATGTCCACGCACGGCTTGTAGTTCAGGCGTTCATCCCCCGGCAGGATTT 360 | || ||||| ||||||||||| ||||||||||| || || || || || ||||| || | Sbjct 1332 AGCCAAAGGTAATGTCCACGCAGGGCTTGTAGTTGAGCCGCTCGTCACCGGGCAGAATCT 1273 Query 361 TGATCGCGCCACGGCCATCCACCATCATCTGCTTGCCACCCGGGGCCAGCAGCGCCAGGC 420 | | | ||||||||||| | ||||||||| |||||||| ||||||| ||||||||| | Sbjct 1272 TCACGGTTCCACGGCCATCGATCATCATCTGTTTGCCACCGGGGGCCAACAGCGCCAGCC 1213 Query 421 CAGGGCGCAGGATGTCGCCATCCTCGGCTTCCTTGACGCTGATGCGGCACAGATTGTC 478 | |||||||||||||||||||| |||||||||||||||||||| |||||||| ||||| Sbjct 1212 CGGGGCGCAGGATGTCGCCATCTTCGGCTTCCTTGACGCTGATCCGGCACAGCTTGTC 1155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1429960681248