Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= AAMG01001674.1 Length=313 Score E Sequences producing significant alignments: (Bits) Value seq20520 232 1e-58 seq17632 102 1e-19 >seq20520 Length=3809 Score = 232 bits (256), Expect = 1e-58 Identities = 230/297 (77%), Gaps = 3/297 (1%) Strand=Plus/Minus Query 20 GAAATCGCCGTTGAAGACGAAGAGATTGTCCAGCGTATTGCTGGCCGTCGCGTACAAGAA 79 || |||||||| || ||||||||||| || || || || |||||||| || || Sbjct 2810 GAGATCGCCGTGGACGACGAAGAGATCGTTGGCCGCATGGCAGGCCGTCGTGTGCACCTG 2751 Query 80 GCCTCGGGCCGCGTGTACCACACCGTCTACAATCCGCCAAAGGTTGCAGGCAAGGACGAT 139 ||||||||||| ||||| | ||||| ||||| || | | ||||||||||||| Sbjct 2750 GCCTCGGGCCGTACCTACCATGTCCAGTACAACCCGCCGAAAATCGAAGGCAAGGACGAT 2691 Query 140 GTGACCGGCGAAGACCTGGTACAGCGCAAGGACGACACCGAAGAAACCGTTCGTCACCGC 199 || || |||||||||||| | |||||| | ||||||| |||||||||||||| || ||| Sbjct 2690 GTCACTGGCGAAGACCTGATCCAGCGCGATGACGACAAGGAAGAAACCGTTCGCCATCGC 2631 Query 200 CTGTCTGTTTACCATTCGCAAACCAAGCCGCTGGTGGACTTCTACCAGAAGCTGGCTGCT 259 ||||| || ||||| || |||||||| ||||| |||||||||||||||||| | || Sbjct 2630 CTGTCGGTCTACCACAGCCAGACCAAGCCACTGGTAGACTTCTACCAGAAGCTGTCGGCG 2571 Query 260 GCCCA---GGGCAAGCCCAAGTACAGCCACGTTGAAGGCGTTGGCTCGGTATAATCG 313 || | ||||||||||||||||||||| | ||||| || ||||||||| || || Sbjct 2570 ACCAACGGTGGCAAGCCCAAGTACAGCCACATCGAAGGTGTGGGCTCGGTAGAAGCG 2514 >seq17632 Length=15667 Score = 102 bits (112), Expect = 1e-19 Identities = 118/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 35 GACGAAGAGATTGTCCAGCGTATTGCTGGCCGTCGCGTACAAGAAGCCTCGGGCCGCGTG 94 |||||||| ||||| | ||| || |||| ||||| || ||||| ||||| || Sbjct 11280 GACGAAGAAATTGTAAAACGTCTTTCTGGTCGTCGTCAGCATCCTGCCTCTGGCCGTGTA 11221 Query 95 TACCACACCGTCTACAATCCGCCAAAGGTTGCAGGCAAGGACGATGTGACCGGCGAAGAC 154 ||||||| |||||| || ||||| ||||| | ||| ||||| |||| || || ||||| Sbjct 11220 TACCACATCGTCTATAACCCGCCTAAGGTAGAAGGTAAGGATGATGAAACTGGTGAAGAT 11161 Query 155 CTGGTACAGCGCAAGGACGACACCGAAGAAACCGTTCGT 193 ||||||||||| ||| || |||||||| ||||| Sbjct 11160 CTGGTACAGCGTCCGGATGATCTTGAAGAAACTATTCGT 11122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 898923828704