Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= AAMG01001674.1
Length=313
Score E
Sequences producing significant alignments: (Bits) Value
seq20520 232 1e-58
seq17632 102 1e-19
>seq20520
Length=3809
Score = 232 bits (256), Expect = 1e-58
Identities = 230/297 (77%), Gaps = 3/297 (1%)
Strand=Plus/Minus
Query 20 GAAATCGCCGTTGAAGACGAAGAGATTGTCCAGCGTATTGCTGGCCGTCGCGTACAAGAA 79
|| |||||||| || ||||||||||| || || || || |||||||| || ||
Sbjct 2810 GAGATCGCCGTGGACGACGAAGAGATCGTTGGCCGCATGGCAGGCCGTCGTGTGCACCTG 2751
Query 80 GCCTCGGGCCGCGTGTACCACACCGTCTACAATCCGCCAAAGGTTGCAGGCAAGGACGAT 139
||||||||||| ||||| | ||||| ||||| || | | |||||||||||||
Sbjct 2750 GCCTCGGGCCGTACCTACCATGTCCAGTACAACCCGCCGAAAATCGAAGGCAAGGACGAT 2691
Query 140 GTGACCGGCGAAGACCTGGTACAGCGCAAGGACGACACCGAAGAAACCGTTCGTCACCGC 199
|| || |||||||||||| | |||||| | ||||||| |||||||||||||| || |||
Sbjct 2690 GTCACTGGCGAAGACCTGATCCAGCGCGATGACGACAAGGAAGAAACCGTTCGCCATCGC 2631
Query 200 CTGTCTGTTTACCATTCGCAAACCAAGCCGCTGGTGGACTTCTACCAGAAGCTGGCTGCT 259
||||| || ||||| || |||||||| ||||| |||||||||||||||||| | ||
Sbjct 2630 CTGTCGGTCTACCACAGCCAGACCAAGCCACTGGTAGACTTCTACCAGAAGCTGTCGGCG 2571
Query 260 GCCCA---GGGCAAGCCCAAGTACAGCCACGTTGAAGGCGTTGGCTCGGTATAATCG 313
|| | ||||||||||||||||||||| | ||||| || ||||||||| || ||
Sbjct 2570 ACCAACGGTGGCAAGCCCAAGTACAGCCACATCGAAGGTGTGGGCTCGGTAGAAGCG 2514
>seq17632
Length=15667
Score = 102 bits (112), Expect = 1e-19
Identities = 118/159 (74%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 35 GACGAAGAGATTGTCCAGCGTATTGCTGGCCGTCGCGTACAAGAAGCCTCGGGCCGCGTG 94
|||||||| ||||| | ||| || |||| ||||| || ||||| ||||| ||
Sbjct 11280 GACGAAGAAATTGTAAAACGTCTTTCTGGTCGTCGTCAGCATCCTGCCTCTGGCCGTGTA 11221
Query 95 TACCACACCGTCTACAATCCGCCAAAGGTTGCAGGCAAGGACGATGTGACCGGCGAAGAC 154
||||||| |||||| || ||||| ||||| | ||| ||||| |||| || || |||||
Sbjct 11220 TACCACATCGTCTATAACCCGCCTAAGGTAGAAGGTAAGGATGATGAAACTGGTGAAGAT 11161
Query 155 CTGGTACAGCGCAAGGACGACACCGAAGAAACCGTTCGT 193
||||||||||| ||| || |||||||| |||||
Sbjct 11160 CTGGTACAGCGTCCGGATGATCTTGAAGAAACTATTCGT 11122
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 898923828704
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |