Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= AAMG01001688.1
Length=394
Score E
Sequences producing significant alignments: (Bits) Value
seq9311 309 7e-82
seq11968 248 2e-63
>seq9311
Length=16340
Score = 309 bits (342), Expect = 7e-82
Identities = 305/394 (77%), Gaps = 0/394 (0%)
Strand=Plus/Minus
Query 1 CGATGGTCAGCAACTCGCCGCCCACCTGGGTCCACGCCAGGCCAGTGACCTGACCGACTT 60
||||||| ||||| ||||||||||| || ||||| ||||| || || ||||| |||| |
Sbjct 10641 CGATGGTGAGCAATTCGCCGCCCACTTGTGTCCATGCCAGACCCGTCACCTGGCCGATCT 10582
Query 61 GATCCTGCTGCTCGGCCAGGCCGTAGCTGAATTTGCGCACGCCGAGGAAGTGCTCCAGGG 120
| |||||||||||||||||||| || | ||| ||||||||||| || | ||| || ||
Sbjct 10581 GGTCCTGCTGCTCGGCCAGGCCATAACGGAACTTGCGCACGCCCAGAAGGTGTTCGAGCT 10522
Query 121 AGTCGGCCGTGACCTTCACCGAGAAGCGTTTTTCCAGCGCATGTTCCTTGACCGCCTTGC 180
||| | || ||||| || || | |||| | |||||||||||||| |||| |
Sbjct 10521 GCTCGCCGGTCACCTTGACGTTGACCTGCTTTTGCCCTGCATGTTCCTTGACGACCTTAC 10462
Query 181 GGCAGATCTTCGCGATCTGGCGCTCCAGGCCACGCACACCGGCTTCGCGGGTGTAGTAGC 240
|||||| ||| || ||||| ||||| || ||||||||||| |||||||| |||||||| |
Sbjct 10461 GGCAGACCTTGGCAATCTGACGCTCAAGACCACGCACACCCGCTTCGCGCGTGTAGTAAC 10402
Query 241 GGACGATGTCGCGGATCGTGCCGACTTCAAATTCGATCTCGCCCTTCTTCAGGCCATTGG 300
| | ||||||||| || | ||| || | || | ||| | || |||||||| || |
Sbjct 10401 GAATGATGTCGCGAATGGCCGAGACATCGATCTCCAGCTCTTCTTTTTTCAGGCCGTTCG 10342
Query 301 CCGAAATCTGCTTGGGCGCGAGGTACTTGATGGCGATGTTGATCTTCTCGTCTTCGGTGT 360
|| | |||||||||| | ||||| |||| |||||||| || || || ||||||||||
Sbjct 10341 CCTTGACCTGCTTGGGCACCAGGTATTTGACTGCGATGTTTATTTTTTCATCTTCGGTGT 10282
Query 361 AACCCGGCAGGCGAATCACTTCCATCCGGTCCAG 394
|||||||||| ||||| | ||||||||||||||
Sbjct 10281 AACCCGGCAGACGAATGATCTCCATCCGGTCCAG 10248
>seq11968
Length=1860
Score = 248 bits (274), Expect = 2e-63
Identities = 164/182 (90%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 213 CGCACACCGGCTTCGCGGGTGTAGTAGCGGACGATGTCGCGGATCGTGCCGACTTCAAAT 272
|| |||||||| ||||||||||||||||| |||||||| ||||||| |||| || |||
Sbjct 1858 CGTACACCGGCCTCGCGGGTGTAGTAGCGCACGATGTCACGGATCGCCTCGACCTCGAAT 1799
Query 273 TCGATCTCGCCCTTCTTCAGGCCATTGGCCGAAATCTGCTTGGGCGCGAGGTACTTGATG 332
||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||
Sbjct 1798 TCGATCTCGCCCTTCTTCAGGCCGTTCGCCGAAATCTGCTTGGGCGCCAGGTACTTGACT 1739
Query 333 GCGATGTTGATCTTCTCGTCTTCGGTGTAACCCGGCAGGCGAATCACTTCCATCCGGTCC 392
||||||||||||||||||||||||||||| |||||||| |||||||| |||||||| |||
Sbjct 1738 GCGATGTTGATCTTCTCGTCTTCGGTGTAGCCCGGCAGACGAATCACCTCCATCCGATCC 1679
Query 393 AG 394
||
Sbjct 1678 AG 1677
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1158044220608
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |