Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= AAMG01001745.1 Length=273 Score E Sequences producing significant alignments: (Bits) Value seq12777 136 6e-30 >seq12777 Length=2028 Score = 136 bits (150), Expect = 6e-30 Identities = 183/252 (73%), Gaps = 7/252 (3%) Strand=Plus/Minus Query 29 GGGGCACCAACCGCCATTGATCGGGCACAGATCCAGACGCGTGCCGGCATACACCACCGG 88 |||||| || || || |||||| || |||||| || ||||| ||||| ||||| || Sbjct 417 GGGGCAACAGCCACCGCTGATCGCATACCAATCCAGCCGGGTGCCTGCATAGACCACGGG 358 Query 89 GGCGCCCGGTTGCGCGGCATCCAGCGTGCGCGCGGTGGCACAGCCGGTGAGTTGCAGC-- 146 || || || | | | ||||||| ||||| | ||||| ||||| ||| || | Sbjct 357 CGCCCCTGGCTTGGTGCCATCCAGGGTGCGTACCGTGGCGCAGCCACCGAGCATCAACAC 298 Query 147 -GCCA---TCAAGAGCAGCAGTGCTTT-ATTCATCGCCGCCCAGGTGGTGCTCACCCCAA 201 |||| || | |||| | ||| | ||||| | || ||| || ||||||||| Sbjct 297 AGCCAACGTCCCGGCCAGCCCTCTTTTCAATCATCCACCCCATAGTGATGTTCACCCCAA 238 Query 202 CGTGGCAGCATGTCCTGGGGAATGTTCAACAGGTTGAGAATGCGCGCCACCACAAAGTCC 261 || |||||||||||||| || ||||||| || |||||| |||||||||||||| ||||| Sbjct 237 CGCGGCAGCATGTCCTGAGGGATGTTCAGCAAGTTGAGGATGCGCGCCACCACGAAGTCG 178 Query 262 ACCAGGTCATCG 273 ||||| || ||| Sbjct 177 ACCAGATCGTCG 166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 774169591074