Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= AAMG01001951.1
Length=416
Score E
Sequences producing significant alignments: (Bits) Value
seq27934 262 1e-67
seq100 107 5e-21
seq8504 95.1 3e-17
seq19579 84.2 5e-14
>seq27934
Length=6183
Score = 262 bits (290), Expect = 1e-67
Identities = 307/415 (74%), Gaps = 0/415 (0%)
Strand=Plus/Plus
Query 2 CCATCCCAACGCCATGACCCAGGTGGTGTTTGGCGAAAACGGCGAGCTGCACCGCGACAC 61
||| || ||||||||||||| |||| ||||| | ||||| | |||||||| ||
Sbjct 4503 CCACCCGAACGCCATGACCCTTGTGGCAGAAGGCGAGCATGGCGAAATTCACCGCGATAC 4562
Query 62 CTATTACTCGGTGGGTGGCGGTTTCGTGGTGGATGAAGCCCAGGCCCAAAGCGGTGTGGC 121
||| |||||||| || || || |||||||| |||| ||||||||| || || |||
Sbjct 4563 CTACTACTCGGTCGGCGGTGGCTTCGTGGTCGATGCCGCCCAGGCCGCCAGTGGCGTGCT 4622
Query 122 GGACATGGACCGTACCGAGCTGCCCTATGATTTTTCCAGTGCCGTGGAGCTGTTGCAGCT 181
|||| |||| |||| |||||| || ||||| ||| || | || ||||||| ||
Sbjct 4623 GGACGCCGACCAGACCGTGCTGCCTTACGATTTCAACAGCGCGGCTGAACTGTTGCGCCT 4682
Query 182 GTGCAAGACCCACAACCTGCGCGTTGCCGAACTGATGCTGGCGAATGAAAAAACCTGGCG 241
||||||| || ||||| |||| | || ||||| |||| |||||| ||||||
Sbjct 4683 GTGCAAGCAAAACGACCTGAGCGTGTCGCAATTGATGATGGCCAATGAACGGGTCTGGCG 4742
Query 242 CAGCGAAGAAGAAATCCGCAGCGGCCTGATGAAACTCTGGCGCGCCATGCAGGATTGCGT 301
|||||| | || || ||| ||||||| | || ||| ||||||||||| |||||
Sbjct 4743 CAGCGAGGCGGAGATTCGCGCCGGCCTGCACACGCTTTGGGATGCCATGCAGGAGTGCGT 4802
Query 302 GGAGCAGGGCCTCAAGCACGAAGGTATCCTGCCCGGCGGCTTGAACGTGCGCCGTCGCGC 361
| | || |||||| ||||||| | || || ||||| ||||||||||||| || ||
Sbjct 4803 CAACAATGGGCTCAAGTACGAAGGCACGCTTCCGGGCGGGCTGAACGTGCGCCGCCGTGC 4862
Query 362 TGCCAAGTTACACCGCAGCTTGCAGGAGCTGAACAAGCCCAATGTGATCGGCTCG 416
||||||| | ||||||||| |||||||| | ||||||||| ||||||||||||
Sbjct 4863 TGCCAAGCTGCACCGCAGCCTGCAGGAGATCGGCAAGCCCAACGTGATCGGCTCG 4917
>seq100
Length=216
Score = 107 bits (118), Expect = 5e-21
Identities = 124/167 (74%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 250 AAGAAATCCGCAGCGGCCTGATGAAACTCTGGCGCGCCATGCAGGATTGCGTGGAGCAGG 309
|||| ||||||||||||||| || | ||||| | |||| || |||||||| ||||
Sbjct 216 AAGATATCCGCAGCGGCCTGCTGCATATCTGGTCGGTGATGCGCGAGTGCGTGGAACAGG 157
Query 310 GCCTCAAGCACGAAGGTATCCTGCCCGGCGGCTTGAACGTGCGCCGTCGCGCTGCCAAGT 369
|||| | ||||| ||||||||||| ||| || | |||| ||||||||| || ||||
Sbjct 156 GCCTGCGCGATGAAGGCATCCTGCCCGGTGGCCTGGATGTGCCCCGTCGCGCCGCGAAGT 97
Query 370 TACACCGCAGCTTGCAGGAGCTGAACAAGCCCAATGTGATCGGCTCG 416
| || |||| | || ||| | |||||||| |||||| ||||
Sbjct 96 TGCATCGCAACCTGTTGGAAATCGGTAAGCCCAACGTGATCACCTCG 50
>seq8504
Length=2398
Score = 95.1 bits (104), Expect = 3e-17
Identities = 111/146 (76%), Gaps = 7/146 (5%)
Strand=Plus/Minus
Query 215 GATGCTGGCGAATGAAAAAACCTGGCGCAGCGAAGAAGAAATCCGCAGCGGCCTGATGAA 274
||||||| | ||||||| |||||||| |||| |||| ||||||||| || ||||
Sbjct 200 GATGCTGACCAATGAAAGTGCCTGGCGCCCGGAAGCCGAAACCCGCAGCGGTTTGTTGAA 141
Query 275 ACTCTGGCGCGCCATGCAGGATTGCGTGGA-GCAGGGCCTCAAGC-ACGAAGGTATCCTG 332
|||||| | ||||||||||||||| || || || || || ||||||| ||| ||
Sbjct 140 GATCTGGCAGGTCATGCAGGATTGCGTCGATGCCGG--CTGTCGCAACGAAGGCATCTTG 83
Query 333 CCCGGCGGCTTGAACGT---GCGCCG 355
||||| |||||||| || ||||||
Sbjct 82 CCCGGAGGCTTGAAGGTCAAGCGCCG 57
>seq19579
Length=5510
Score = 84.2 bits (92), Expect = 5e-14
Identities = 102/139 (73%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 277 TCTGGCGCGCCATGCAGGATTGCGTGGAGCAGGGCCTCAAGCACGAAGGTATCCTGCCCG 336
||||| ||||||| || ||||| || | || || |||| || | |||| |
Sbjct 27 TCTGGGCTGCCATGCGCGAGTGCGTCGACAATGGGCTGCGCAACGAGGGCGTATTGCCAG 86
Query 337 GCGGCTTGAACGTGCGCCGTCGCGCTGCCAAGTTACACCGCAGCTTGCAGGAGCTGAACA 396
|||||||| | || || || || |||||||| |||||||||||||| |||||| ||
Sbjct 87 GCGGCTTGCAGGTCAAGCGCCGGGCGGCCAAGTTGCACCGCAGCTTGCAAGAGCTGGGCA 146
Query 397 AGCCCAATGTGATCGGCTC 415
|||||||||| ||||| ||
Sbjct 147 AGCCCAATGTCATCGGTTC 165
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1228422598656
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |