Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= AAMG01001997.1
Length=304
Score E
Sequences producing significant alignments: (Bits) Value
seq29736 453 2e-125
seq27072 86.0 1e-14
>seq29736
Length=1966
Score = 453 bits (502), Expect = 2e-125
Identities = 286/304 (94%), Gaps = 4/304 (1%)
Strand=Plus/Minus
Query 1 CCGCATCGTCAAACGCAGGGAACTTCGCCAGCTTCCATTCGGTTCCCCGAGTTTCttttt 60
||||||||||||| ||||||||||| ||||||| ||||| |||| ||||||||| |||||
Sbjct 1513 CCGCATCGTCAAATGCAGGGAACTT-GCCAGCT-CCATT-GGTTACCCGAGTTTATTTTT 1457
Query 61 ttttCGCAAGCGGGCCAATCGTTGGCCACGCGACAGGGCATTCAAGCAGTTGAAATTAGA 120
||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1456 TTT-CGCAAGCGGGCCAATCGTTGGCCACGCGACAGGGCATTCAAGCAGATGAAATTAGA 1398
Query 121 AAATGCGCTCTAAACAGCAAGACCGTTGAGCTAGAGCATCAGCCGCACGACCGACTCACT 180
|||||||||||||||||||||| | || |||||||||||||||||||||||||||||||
Sbjct 1397 AAATGCGCTCTAAACAGCAAGATCCCTGTGCTAGAGCATCAGCCGCACGACCGACTCACT 1338
Query 181 CGGATCGCGGGTTTTACCAGCGGCTTTGAGCTCGGCCAGGTAGTCGGCCCACAAAGCGTC 240
||||||||||||||| |||||||||||||||||| |||||||||||||||| | ||||||
Sbjct 1337 CGGATCGCGGGTTTTTCCAGCGGCTTTGAGCTCGTCCAGGTAGTCGGCCCATAGAGCGTC 1278
Query 241 CTGACGTACGGCCAACTGATAGAGGTAGTCCCAGGTGAACAGTCCGCTGTCATGACCGTC 300
|||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1277 CTGACGTACGGCCAGCTGATAGAGATAGTCCCAGGTGAACAGTCCGCTGTCATGACCGTC 1218
Query 301 GTCG 304
||||
Sbjct 1217 GTCG 1214
>seq27072
Length=12694
Score = 86.0 bits (94), Expect = 1e-14
Identities = 71/87 (82%), Gaps = 0/87 (0%)
Strand=Plus/Plus
Query 218 AGGTAGTCGGCCCACAAAGCGTCCTGACGTACGGCCAACTGATAGAGGTAGTCCCAGGTG 277
||||| ||||||||||| |||||||||| | |||||| | ||||| |||||||||
Sbjct 2283 AGGTATTCGGCCCACAAGACGTCCTGACGCAGACACAACTGTTCCAGGTATTCCCAGGTG 2342
Query 278 AACAGTCCGCTGTCATGACCGTCGTCG 304
||||| || |||||||| || ||||||
Sbjct 2343 AACAGACCACTGTCATGGCCATCGTCG 2369
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 870132674048
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |