Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= AAMG01002002.1
Length=198
Score E
Sequences producing significant alignments: (Bits) Value
seq12702 246 3e-63
seq8261 179 4e-43
>seq12702
Length=288
Score = 246 bits (272), Expect = 3e-63
Identities = 159/173 (92%), Gaps = 1/173 (1%)
Strand=Plus/Minus
Query 1 TGCTGACCAACATCGCCCGCCTGATGGACAAGGAAGGCAAGGTGTTGACCGGCTTCGACC 60
||||||||||||||||| || |||||||||||||||||||||| |||||||||| |||
Sbjct 267 TGCTGACCAACATCGCCGGCTTGATGGACAAGGAAGGCAAGGTACTGACCGGCTT-GACT 209
Query 61 ACGCAACAAGTGGACGACCTGATCGCCGACGGCACCATCTACGGCGGCATGCTGCCGAAG 120
|| || || || ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 208 ACCCAGCAGGTAGACGACCTGATCGCCGACGGCACCATCTACGGCGGCATGTTGCCGAAG 149
Query 121 ATCCGTTGCGCACTGGAAGCAGTGCAAGGCGGCGTGGGCAGCTCGCTGATCCT 173
|||||||||||||||||||| ||||| |||||||| |||||||||||||||||
Sbjct 148 ATCCGTTGCGCACTGGAAGCCGTGCAGGGCGGCGTCGGCAGCTCGCTGATCCT 96
>seq8261
Length=4867
Score = 179 bits (198), Expect = 4e-43
Identities = 145/174 (83%), Gaps = 1/174 (1%)
Strand=Plus/Minus
Query 1 TGCTGACCAACATCGCCCGCCTGATGGACAAGGAAGGCAAGGTGTTGACCGGCTTCGACC 60
||||||||||||||||| | |||||||||||| | ||| |||| |||||||| | ||||
Sbjct 3113 TGCTGACCAACATCGCCGGGCTGATGGACAAGCAGGGCCAGGTCTTGACCGGTCT-GACC 3055
Query 61 ACGCAACAAGTGGACGACCTGATCGCCGACGGCACCATCTACGGCGGCATGCTGCCGAAG 120
|| | || || |||| |||||||||||||||||||||||||| |||||||| ||||||
Sbjct 3054 ACAGAGCAGGTCAACGAACTGATCGCCGACGGCACCATCTACGGTGGCATGCTTCCGAAG 2995
Query 121 ATCCGTTGCGCACTGGAAGCAGTGCAAGGCGGCGTGGGCAGCTCGCTGATCCTC 174
||| ||||| ||||| || ||||||||||||||| |||||||| ||| ||
Sbjct 2994 ATCAAATGCGCCCTGGATGCGGTGCAAGGCGGCGTGAACAGCTCGCACATCATC 2941
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 534240998799
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |