Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= AAMG01002002.1 Length=198 Score E Sequences producing significant alignments: (Bits) Value seq12702 246 3e-63 seq8261 179 4e-43 >seq12702 Length=288 Score = 246 bits (272), Expect = 3e-63 Identities = 159/173 (92%), Gaps = 1/173 (1%) Strand=Plus/Minus Query 1 TGCTGACCAACATCGCCCGCCTGATGGACAAGGAAGGCAAGGTGTTGACCGGCTTCGACC 60 ||||||||||||||||| || |||||||||||||||||||||| |||||||||| ||| Sbjct 267 TGCTGACCAACATCGCCGGCTTGATGGACAAGGAAGGCAAGGTACTGACCGGCTT-GACT 209 Query 61 ACGCAACAAGTGGACGACCTGATCGCCGACGGCACCATCTACGGCGGCATGCTGCCGAAG 120 || || || || ||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 208 ACCCAGCAGGTAGACGACCTGATCGCCGACGGCACCATCTACGGCGGCATGTTGCCGAAG 149 Query 121 ATCCGTTGCGCACTGGAAGCAGTGCAAGGCGGCGTGGGCAGCTCGCTGATCCT 173 |||||||||||||||||||| ||||| |||||||| ||||||||||||||||| Sbjct 148 ATCCGTTGCGCACTGGAAGCCGTGCAGGGCGGCGTCGGCAGCTCGCTGATCCT 96 >seq8261 Length=4867 Score = 179 bits (198), Expect = 4e-43 Identities = 145/174 (83%), Gaps = 1/174 (1%) Strand=Plus/Minus Query 1 TGCTGACCAACATCGCCCGCCTGATGGACAAGGAAGGCAAGGTGTTGACCGGCTTCGACC 60 ||||||||||||||||| | |||||||||||| | ||| |||| |||||||| | |||| Sbjct 3113 TGCTGACCAACATCGCCGGGCTGATGGACAAGCAGGGCCAGGTCTTGACCGGTCT-GACC 3055 Query 61 ACGCAACAAGTGGACGACCTGATCGCCGACGGCACCATCTACGGCGGCATGCTGCCGAAG 120 || | || || |||| |||||||||||||||||||||||||| |||||||| |||||| Sbjct 3054 ACAGAGCAGGTCAACGAACTGATCGCCGACGGCACCATCTACGGTGGCATGCTTCCGAAG 2995 Query 121 ATCCGTTGCGCACTGGAAGCAGTGCAAGGCGGCGTGGGCAGCTCGCTGATCCTC 174 ||| ||||| ||||| || ||||||||||||||| |||||||| ||| || Sbjct 2994 ATCAAATGCGCCCTGGATGCGGTGCAAGGCGGCGTGAACAGCTCGCACATCATC 2941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 534240998799