Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= AAMG01002011.1 Length=284 Score E Sequences producing significant alignments: (Bits) Value seq21436 279 8e-73 >seq21436 Length=5494 Score = 279 bits (308), Expect = 8e-73 Identities = 233/284 (82%), Gaps = 1/284 (0%) Strand=Plus/Plus Query 1 TACGCCTTGCGGCCGCTGGATTTCGCGGTGTTCCCGACGTATTCTGCAGGTGGCGACCCT 60 ||||| |||| |||||||| ||||| | ||||| || || |||| |||||||||||| Sbjct 3436 TACGCGCTGCGCCCGCTGGACTTCGCCGCTTTCCCCACC-ATCCTGCTGGTGGCGACCCT 3494 Query 61 GCTACGTCTGGCATTGAACGTCGCCTCCACGCGGGTGGTGATGCTCCACGGCCAGGACGG 120 ||| || ||||| ||||||| || ||||| || ||||| ||||| ||||||||||| || Sbjct 3495 GCTGCGACTGGCCCTGAACGTGGCTTCCACCCGCGTGGTCATGCTGCACGGCCAGGAAGG 3554 Query 121 CCATGCCGCTGCCGGTAAGGTGATCCAGGCCTTCGGTGAGGTGGTGATCGGCGGTAACTA 180 || | ||| || || | |||||||||||||||||| || ||||| |||||||| ||||| Sbjct 3555 GCACGGCGCCGCGGGCATGGTGATCCAGGCCTTCGGCGATGTGGTCATCGGCGGCAACTA 3614 Query 181 CGTGGTCGGTATCGTGGTGTTCGCGATCCTGATGATCATCAACTTTGTGGTGGTGACCAA 240 |||||||||| ||||| ||||| ||||| |||||||||||||| ||||| |||||||| Sbjct 3615 CGTGGTCGGTGCGGTGGTCTTCGCCATCCTCATGATCATCAACTTCGTGGTAGTGACCAA 3674 Query 241 GGGCGCCGGGCGGATTTCCGAGGTGAGCGCGCGGTTTACCCTCG 284 ||| || ||||| || || ||||| ||||| || || ||||||| Sbjct 3675 GGGTGCGGGGCGTATCTCGGAGGTCAGCGCACGCTTCACCCTCG 3718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 809359117941