Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= AAMG01002049.1
Length=571
Score E
Sequences producing significant alignments: (Bits) Value
seq29624 403 6e-110
seq11829 120 1e-24
>seq29624
Length=14981
Score = 403 bits (446), Expect = 6e-110
Identities = 431/559 (77%), Gaps = 9/559 (2%)
Strand=Plus/Plus
Query 16 TTCAGGTCGTTCCGGGTCAAGGTCGGCCAGGGCTTCCTGATGATCTTCACCGGTCTAGTT 75
||| |||| ||||| ||| ||| | | |||| | |||||||| | | || | ||
Sbjct 1729 TTCTGGTCCTTCCGCATCATGGTGGCGCTGGGCATGTTGATGATCGCCGCTGGCGT-GTG 1787
Query 76 CAGCCAGTGGCTAGCGCCGGGGCGACAAGATGTACACGTCCAAGCCGTTCCTGTACCTGG 135
|||| || | |||| |||| |||| ||||||| || |||||||||| | | |
Sbjct 1788 GAGCCT-TGTATTGCGCAAAGGCGGCAAGCTGTACACCTCGCGGCCGTTCCTGCATTTCG 1846
Query 136 CGTTGTGGATGGGCCCGTCCGGGTTGATCGCGATTCTCGCCGGCTGGTTCACCACGGAAA 195
| |||||||| || || || ||| | || || |||||||||||||||||||| ||||
Sbjct 1847 TGACCTGGATGGGGCCTTCAGGATTGCTGGCAATCCTCGCCGGCTGGTTCACCACCGAAA 1906
Query 196 TCGGCCGTCAGCCGTGGGTGGTCTACGGCCTGATGCGCACGGCGGATG-CGTCCTCCGGG 254
||||||| ||||| |||||||||||||| |||||||||||||| || | |||| |||
Sbjct 1907 TCGGCCGCCAGCCCTGGGTGGTCTACGGGCTGATGCGCACGGCCGACGGCGTC-TCCAAC 1965
Query 255 CATAGCCTGGTGCAGATGACGATTACGCTGGTGTTGTTCGTGGTGGTGTACTTCGCGCTG 314
|| ||| | || || | | || |||||| ||||||||||||||||||||| |||
Sbjct 1966 CACAGCTATGCCCAACTGGGGTTCACCCTGGTGGCGTTCGTGGTGGTGTACTTCGCCCTG 2025
Query 315 TTCGGTGCCGGTCTGGGCTACATGATGCGCCTGGTGCGCAAAGGTCCGCAGACCCACGAA 374
||||| | || | | |||||||||||||||||||||||| || ||||| ||| ||||
Sbjct 2026 TTCGGCACAGGGTTCGCCTACATGATGCGCCTGGTGCGCAAGGGCCCGCATACCGGCGAA 2085
Query 375 GGCGATGAGCCGACCCACGGTGGTCCTGGCCAGAAACGCACGCCAGCCCGTCCGTTGTCT 434
|||||| ||| | | || |||||||||| ||||||||||| || || || |||||
Sbjct 2086 GGCGATCAGCAGCGTCCGGGCGGTCCTGGCCGCAAACGCACGCCGGCGCGGCCATTGTCC 2145
Query 435 GCCGCCGATGATGGCAGCGATGACGACCACACCCACATCCAGCACAAGGGGCATTGAG-- 492
|||||||| || |||||||||| | ||||| || | || | ||||||| | ||||
Sbjct 2146 GCCGCCGACGAAGGCAGCGATG-CCACCAC-TGCAGA-CCTGAGCAAGGGGAACTGAGCC 2202
Query 493 ATGGGTATTGATCTTCCGCTGATCCGGGCCGTGATCATCATCTTCGGCATCATGATGTAC 552
|||||||| |||||||| |||||| |||||| ||||||||||||||| |||||||||||
Sbjct 2203 ATGGGTATCGATCTTCCACTGATCTGGGCCGGCATCATCATCTTCGGCGTCATGATGTAC 2262
Query 553 GTGGTCATGGACGGCTTCG 571
||||| |||||||||||||
Sbjct 2263 GTGGTGATGGACGGCTTCG 2281
>seq11829
Length=1437
Score = 120 bits (132), Expect = 1e-24
Identities = 85/95 (89%), Gaps = 2/95 (2%)
Strand=Plus/Minus
Query 4 TCGACCGTCGAGTTCAGGTCGTTCCGGGTCAAGGTCGGCCAGGGCTTCCTGATGATCTTC 63
|||||||| | |||| ||||||||||||||| |||||||| ||| |||||||||||||||
Sbjct 93 TCGACCGTTGTGTTCTGGTCGTTCCGGGTCATGGTCGGCCTGGGGTTCCTGATGATCTTC 34
Query 64 ACCGGTCTAGTTCAGCCAGTGGCTAGCGCCGGGGC 98
|||||| | |||||||| |||||| ||||||||||
Sbjct 33 ACCGGT-TTGTTCAGCCTGTGGCT-GCGCCGGGGC 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1724270262176
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |