Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= AAMG01002051.1 Length=353 Score E Sequences producing significant alignments: (Bits) Value seq21075 302 9e-80 seq21632 181 2e-43 >seq21075 Length=22690 Score = 302 bits (334), Expect = 9e-80 Identities = 281/354 (79%), Gaps = 2/354 (1%) Strand=Plus/Minus Query 1 CGACCGCCTGCGCCATGTGGCGGAGCGCGCCGAGCTGGGTGAAGGCCGCGAAGCGATCAT 60 |||||||||||||||||| |||||||| || |||||||||||| |||||||| ||||| Sbjct 8613 CGACCGCCTGCGCCATGTCGCGGAGCGGGCAGAGCTGGGTGAAAAGCGCGAAGCTATCAT 8554 Query 61 CGCCGTGACCATTCCCGAGAAGCCCGGCAGCTTCAAGGCGTTCTGCGAGGCCGTGGGCAA 120 ||| || ||||| || ||| ||||| ||||||||||| |||||||| || |||||||| Sbjct 8553 CGCGGTCACCATCCCGGAGCGCCCCGGTAGCTTCAAGGCCTTCTGCGAAGCGGTGGGCAA 8494 Query 121 GCGCCAGATCACCGAATTCAACTACCGTTTCCACTCCGGCAGCGAGGCGCACATCTTTGT 180 ||||||||||||||||||||||||||| ||| || | || ||||||||||| || Sbjct 8493 GCGCCAGATCACCGAATTCAACTACCGCAAACACACCTCCGATGAAGCGCACATCTTCGT 8434 Query 181 CGGCGTGCAGACCCACCCCGACACCGACCCCCGCAGCGCGCTGAT-CGCCAGCCTGACCG 239 |||||||||||||| || || | |||||||||| || || | | ||| ||| || Sbjct 8433 GGGCGTGCAGACCCATCCGGAAAACGACCCCCGCGCGGCATTGGTGCAGCAG-TTGATCG 8375 Query 240 AGCAGGGTTTCCCGGTGCTGGACCTGACCGAGAATGAGCTGGCCAAGCTGCACATCCGCC 299 | ||||| |||||||| |||||| ||||| |||||||||||||| ||||||| |||| Sbjct 8374 ACCAGGGCTTCCCGGTCACGGACCTTACCGACAATGAGCTGGCCAAATTGCACATTCGCC 8315 Query 300 ATATGGTCGGCGGCCATGCGGCGCACGTCAGCAATGAAGTGGTGTTCCGCTTCG 353 | ||||| ||||| || |||| | ||| ||||| ||||| | || |||| Sbjct 8314 ACATGGTGGGCGGGCACTCGGCCGGGGCGAGCGATGAAATGGTGCTGCGTTTCG 8261 >seq21632 Length=10942 Score = 181 bits (200), Expect = 2e-43 Identities = 237/328 (72%), Gaps = 10/328 (3%) Strand=Plus/Minus Query 1 CGACCGCCTGCGCCATGTGGCGGAGCGCGCCGAGCTGGGTGAAGGCCGCGAAGCGATCAT 60 ||| || |||||||||||||| ||||||||||| ||||||||| ||||||||| | || Sbjct 10689 CGATCGGCTGCGCCATGTGGCAGAGCGCGCCGAACTGGGTGAACAGCGCGAAGCGGTGAT 10630 Query 61 CGCCGTGACCATTCCCGAGAAGCCCGGCAGCTTCAAGGCGTTCTGCGAGGCCGTGGGCAA 120 ||| |||||||| ||||| |||| || |||||| |||||||||| | || ||||||| Sbjct 10629 CGCGGTGACCATCCCCGACCAGCCTGGGAGCTTCCGGGCGTTCTGCCAAGCGTTGGGCAA 10570 Query 121 GCGCCAGATCACCGAATTCAACTACCGTTTCCACTCCGGCA-----GCGAGGCGCACATC 175 ||||||| |||| |||||||||||||| | ||| | |||| || |||| | Sbjct 10569 GCGCCAGGTCACGGAATTCAACTACCGCTGCCAGCCGGGCAAACCTGCAAGGC-----TG 10515 Query 176 TTTGTCGGCGTGCAGACCCACCCCGACACCGACCCCCGCAGCGCGCTGATCGCCAGCCTG 235 || || || ||||| || ||||| || || ||| |||| | | | || Sbjct 10514 TTCGTGGGTGTGCAAACGCACCCATTGCAGGATCCACGCGATCAGCTGTTGAACGGTTTG 10455 Query 236 ACCGAGCAGGGTTTCCCGGTGCTGGACCTGACCGAGAATGAGCTGGCCAAGCTGCACATC 295 | || || | ||| ||||||||||||| |||||||||||||||||||| | Sbjct 10454 CAGGCTCAAGGCTATGAGGTTGTGGACCTGACCGACAATGAGCTGGCCAAGCTGCATGTG 10395 Query 296 CGCCATATGGTCGGCGGCCATGCGGCGC 323 ||||||| || || || | | ||||| Sbjct 10394 CGCCATACCGTGGGTGGGCCTTTGGCGC 10367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1026884516064