Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= AAMG01002055.1
Length=294
Score E
Sequences producing significant alignments: (Bits) Value
seq9395 325 7e-87
seq26990 93.3 7e-17
>seq9395
Length=12957
Score = 325 bits (360), Expect = 7e-87
Identities = 242/279 (87%), Gaps = 8/279 (3%)
Strand=Plus/Minus
Query 16 AGACCACAGACGGCAACGGCGATGACCAGCAACAGCGGGAAATTTAGCGACATAGGACCT 75
||||| || ||| ||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 4313 AGACCGCACACGAACACGGCAATGACGAGCAACAGCGGGAAATTTAGCGACATAGGACCT 4254
Query 76 AACTATCCAACCTGAGCACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACT 135
||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||
Sbjct 4253 AACTATCCAACCTGAGCACGGCGAGGAAGGCTTCTT-GTGGAATTTCCACGTTGCCCACC 4195
Query 136 CGCTTCATGCGTTTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACG 195
| ||||||||||| ||||||||||| |||||||| |||||||| ||| |||| ||
Sbjct 4194 TGTTTCATGCGTTTCTTACCGGCCTTCTGCTTCTCGAGCAGCTT---CTT-CGGC---CG 4142
Query 196 TCACCGCCGTAGCATTTGGCCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCA 255
| ||||| || |||||||||||||||||||||||||| |||||||| | ||| |||||
Sbjct 4141 CCCCCGCCATAACATTTGGCCAGTACGTTCTTTCTGAGCGCCTTGACAGTGGTACGCGCG 4082
Query 256 ATGATCTGCCCGCCAATGGCGGCCTGGATCGCGACGTCG 294
|||||||| || |||||||| ||||||||||| || |||
Sbjct 4081 ATGATCTGGCCACCAATGGCTGCCTGGATCGCCACATCG 4043
>seq26990
Length=11246
Score = 93.3 bits (102), Expect = 7e-17
Identities = 142/201 (71%), Gaps = 1/201 (0%)
Strand=Plus/Minus
Query 93 ACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTT 152
|| |||||||| ||||| | | || ||||| || | ||||| ||||||||||||| ||
Sbjct 8776 ACTGCAAGGAACGCTTCCT-GAGGGATTTCAACACTACCCACCTGCTTCATGCGTTTCTT 8718
Query 153 ACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTT 212
||| | || ||||| || || || |||||| |||||||| || || |||||
Sbjct 8717 ACCTTCTTTCTGCTTAGACAGAAGTTTTTTCTTACGTGACACGTCACCACCATAACATTT 8658
Query 213 GGCCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGATCTGCCCGCCAAT 272
|||| ||||| || | | || || || | | || ||||| ||||| | |||||
Sbjct 8657 CGCCAAGACGTTTTTACGCATGGCTTTTACAGTAGAACGGGCAATAATCTGTGCACCAAT 8598
Query 273 GGCGGCCTGGATCGCGACGTC 293
|| ||||| ||||| || ||
Sbjct 8597 AGCTGCCTGAATCGCTACATC 8577
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 838142502208
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |