Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq9395 325 7e-87 seq26990 93.3 7e-17 >seq9395 Length=12957 Score = 325 bits (360), Expect = 7e-87 Identities = 242/279 (87%), Gaps = 8/279 (3%) Strand=Plus/Minus Query 16 AGACCACAGACGGCAACGGCGATGACCAGCAACAGCGGGAAATTTAGCGACATAGGACCT 75 ||||| || ||| ||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct 4313 AGACCGCACACGAACACGGCAATGACGAGCAACAGCGGGAAATTTAGCGACATAGGACCT 4254 Query 76 AACTATCCAACCTGAGCACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACT 135 ||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||| Sbjct 4253 AACTATCCAACCTGAGCACGGCGAGGAAGGCTTCTT-GTGGAATTTCCACGTTGCCCACC 4195 Query 136 CGCTTCATGCGTTTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACG 195 | ||||||||||| ||||||||||| |||||||| |||||||| ||| |||| || Sbjct 4194 TGTTTCATGCGTTTCTTACCGGCCTTCTGCTTCTCGAGCAGCTT---CTT-CGGC---CG 4142 Query 196 TCACCGCCGTAGCATTTGGCCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCA 255 | ||||| || |||||||||||||||||||||||||| |||||||| | ||| ||||| Sbjct 4141 CCCCCGCCATAACATTTGGCCAGTACGTTCTTTCTGAGCGCCTTGACAGTGGTACGCGCG 4082 Query 256 ATGATCTGCCCGCCAATGGCGGCCTGGATCGCGACGTCG 294 |||||||| || |||||||| ||||||||||| || ||| Sbjct 4081 ATGATCTGGCCACCAATGGCTGCCTGGATCGCCACATCG 4043 >seq26990 Length=11246 Score = 93.3 bits (102), Expect = 7e-17 Identities = 142/201 (71%), Gaps = 1/201 (0%) Strand=Plus/Minus Query 93 ACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTT 152 || |||||||| ||||| | | || ||||| || | ||||| ||||||||||||| || Sbjct 8776 ACTGCAAGGAACGCTTCCT-GAGGGATTTCAACACTACCCACCTGCTTCATGCGTTTCTT 8718 Query 153 ACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTT 212 ||| | || ||||| || || || |||||| |||||||| || || ||||| Sbjct 8717 ACCTTCTTTCTGCTTAGACAGAAGTTTTTTCTTACGTGACACGTCACCACCATAACATTT 8658 Query 213 GGCCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGATCTGCCCGCCAAT 272 |||| ||||| || | | || || || | | || ||||| ||||| | ||||| Sbjct 8657 CGCCAAGACGTTTTTACGCATGGCTTTTACAGTAGAACGGGCAATAATCTGTGCACCAAT 8598 Query 273 GGCGGCCTGGATCGCGACGTC 293 || ||||| ||||| || || Sbjct 8597 AGCTGCCTGAATCGCTACATC 8577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838142502208