Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= AAMG01002062.1 Length=351 Score E Sequences producing significant alignments: (Bits) Value seq6515 459 5e-127 seq6460 122 2e-25 >seq6515 Length=680 Score = 459 bits (508), Expect = 5e-127 Identities = 278/291 (96%), Gaps = 2/291 (1%) Strand=Plus/Minus Query 1 ACCAGGTCACCATCGTCGGCGCCGAATGCCGACCACGGTGCCGGTGTACCAGCGGGGTGA 60 |||||||| |||||||||||||| ||||| |||||||||||||||| ||||||||||||| Sbjct 662 ACCAGGTCGCCATCGTCGGCGCC-AATGCTGACCACGGTGCCGGTG-ACCAGCGGGGTGA 605 Query 61 TTTCCACCACGTCGCCGTTCACATAGGCGTCATCGGTGCTTTCATTGAAGCGCCCGTAGA 120 |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 604 TTTCCACCACGTTGCCGTTCACATAGGCGTCGTCGGTGCTTTCATTGAAGCGCCCGTAGA 545 Query 121 ACTCATACCAGGCCCACACGCCCACCACACTGAGGATGACGATCAGCGCCAGGCCGATCA 180 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 544 ACTCATACCAGGCCCACACGCCCACCACACTCAGGATGACGATCAGCGCCAGGCCGATCA 485 Query 181 GCATCACTTTGCGTTTGCGCGGGTTGGTGTCTTTGGGTTGTTCGGTCGCGTTGGTGCTTT 240 ||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||| | Sbjct 484 GCATCACTTTGCGTTTGCGGGGGTTGGTGTCTTTGGGTTGTTCGGTTGCGTTGTTGCTGT 425 Query 241 CGGCAGTGGCCATGACAAATACCTCAAATTATTCCGTGCGTGTTGCGGGGG 291 ||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct 424 CGGCAGTGGCCATGACAAATACCTCAAATTATTCCGTGCGTGTAGCTGGGG 374 >seq6460 Length=5860 Score = 122 bits (134), Expect = 2e-25 Identities = 154/209 (74%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 1 ACCAGGTCACCATCGTCGGCGCCGAATGCCGACCACGGTGCCGGTGTACCAGCGGGGTGA 60 |||||||| |||||||||||||| ||||| | ||| || ||||| |||| ||| |||| Sbjct 267 ACCAGGTCGCCATCGTCGGCGCC-AATGCTGGTCACCGTCCCGGTC-ACCAACGGCGTGA 210 Query 61 TTTCCACCACGTCGCCGTTCACATAGGCGTCATCGGTGCTTTCATTGAAGCGCCCGTAGA 120 |||| ||||||| |||||| || ||||||||||| ||||| || | | ||||| | Sbjct 209 TTTCGACCACGTTGCCGTTGACGTAGGCGTCATCAGTGCTCTCGTACCAACGCCCAACCA 150 Query 121 ACTCATACCAGGCCCACACGCCCACCACACTGAGGATGACGATCAGCGCCAGGCCGATCA 180 ||||||||||| ||| | | ||| |||||| | | || | |||||| |||| Sbjct 149 GGCTGTACCAGGCCCAAGTGCCTAGCCCACCGAGGATCAGCAGCACCAACAGGCCAATCA 90 Query 181 GCATCACTTTGCGTTTGCGCGGGTTGGTG 209 || | ||||| ||||||| | |||| Sbjct 89 GCCAGAGCTTGCGCTTGCGCGAGGAGGTG 61 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1020486481696