Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= AAMG01002110.1
Length=382
Score E
Sequences producing significant alignments: (Bits) Value
seq20334 479 6e-133
seq24926 351 2e-94
>seq20334
Length=308
Score = 479 bits (530), Expect = 6e-133
Identities = 291/308 (94%), Gaps = 0/308 (0%)
Strand=Plus/Plus
Query 38 GGTCTGGTGCCGCTCCAGGTAGCTGTCCAGGGTGCCGCTGCTGAGCAACGACATCGCCAG 97
||| ||||| || || ||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 1 GGTGTGGTGGCGTTCGAGGTAACTGTCCAGGGTGCCGCTGCTGAGCAACGACATGGCCAG 60
Query 98 TTCATCCAGGCCATCGCTGCGCCCGGCCTGGGGCATCAAGGACAACGAATAACTGACTTC 157
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 61 TTCATCCAGGCCATCGCTGCGCCCGGCCTGGGGCATCAAGGACAGGGAATAACTGACTTC 120
Query 158 CAGCATGCGTGCCAGGTTCTCGGCGCGCTCCAGGTAACGCGACATCCAATACAGATCTGC 217
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 121 CAGCATGCGTGCCAGGTTCTCGGCGCGCTCCAGGTAGCGGGACATCCAATACAGATCTGC 180
Query 218 AGCTGTTCTACGCAGCATACTCAGCCCTCCACCACCCAGGTGTCCTTGGTTCCACCGCCT 277
||| ||||||| || |||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct 181 AGCGGTTCTACTCAACATAGTCAGCCCTCCACCACCCAGGTGTCCTTGGTTCCGCCGCCT 240
Query 278 TGCGACGAGTTGACGACCAGCGAGCCTTCCTTCAGCGCCACGCGGGTCAAGCCACCGGGC 337
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 241 TGCGACGAGTTCACGACCAGCGAGCCTTCCTTCAGCGCCACGCGGGTCAAGCCGCCGGGC 300
Query 338 ACCAGGCG 345
||||||||
Sbjct 301 ACCAGGCG 308
>seq24926
Length=1690
Score = 351 bits (388), Expect = 2e-94
Identities = 308/381 (81%), Gaps = 6/381 (2%)
Strand=Plus/Plus
Query 6 GCAAAGAAGTGCAACATGCGTTCGGCATCCA--GGGTCTGGTGCCGCTCCAGGTAGCTGT 63
||||| ||||||| || |||||| || | || ||| | || ||||| |||| ||
Sbjct 370 GCAAAAAAGTGCAGCAAGCGTTCAGCGTGCAATGGGCCA--TGGCGCTCGTGGTAATCGT 427
Query 64 CCAGGGTGCCGCTGCTGAGCAACGACATCGCCAGTTCATCCAGGCCATCGCTGCGCCCGG 123
|||| |||||| || | | || || ||| |||| ||| | ||||||||||| |||||||
Sbjct 428 CCAGAGTGCCGGTGATCAACAGCGGCATGGCCAATTCGTGCAGGCCATCGCCGCGCCCGT 487
Query 124 CCTGGGGCATCAAGGACAACGAATAACTGACTTCCAGCATGCGTGCCAGGTTCTCGGCGC 183
|||||||||||| |||| |||||| ||||| || ||||||||||| ||||| ||||| |
Sbjct 488 CCTGGGGCATCAGCGACAGCGAATAGCTGACATCGAGCATGCGTGCGAGGTTTTCGGCAC 547
Query 184 GCTCCAGGTAACGCGACATCCAATACAGATCTGCAGCTGTTCTACGCAGCAT--ACTCAG 241
||||||||||||| |||||||| |||| ||| | || ||||||| || ||| ||||
Sbjct 548 GCTCCAGGTAACGTGACATCCAGTACAAATCCGAGGCAGTTCTACTCAACATGGCATCAG 607
Query 242 CCCTCCACCACCCAGGTGTCCTTGGTTCCACCGCCTTGCGACGAGTTGACGACCAGCGAG 301
|||| |||||||||||||| |||||||| ||||| || ||||||||||| |||||||||
Sbjct 608 TCCTCGACCACCCAGGTGTCTTTGGTTCCGCCGCCCTGGGACGAGTTGACCACCAGCGAG 667
Query 302 CCTTCCTTCAGCGCCACGCGGGTCAAGCCACCGGGCACCAGGCGGGTTTCCTTGCCCGAG 361
||||| ||||||||| ||||||| |||||| ||||||| |||||| |||||||| ||
Sbjct 668 CCTTCGCGCAGCGCCACACGGGTCAGGCCACCCGGCACCACGCGGGTGTCCTTGCCGGAC 727
Query 362 AGCACGAAGGGTCGCAAGTCG 382
| ||||||||| |||| ||||
Sbjct 728 AACACGAAGGGGCGCAGGTCG 748
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1119656014400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |