Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= AAMG01002110.1 Length=382 Score E Sequences producing significant alignments: (Bits) Value seq20334 479 6e-133 seq24926 351 2e-94 >seq20334 Length=308 Score = 479 bits (530), Expect = 6e-133 Identities = 291/308 (94%), Gaps = 0/308 (0%) Strand=Plus/Plus Query 38 GGTCTGGTGCCGCTCCAGGTAGCTGTCCAGGGTGCCGCTGCTGAGCAACGACATCGCCAG 97 ||| ||||| || || ||||| |||||||||||||||||||||||||||||||| ||||| Sbjct 1 GGTGTGGTGGCGTTCGAGGTAACTGTCCAGGGTGCCGCTGCTGAGCAACGACATGGCCAG 60 Query 98 TTCATCCAGGCCATCGCTGCGCCCGGCCTGGGGCATCAAGGACAACGAATAACTGACTTC 157 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 61 TTCATCCAGGCCATCGCTGCGCCCGGCCTGGGGCATCAAGGACAGGGAATAACTGACTTC 120 Query 158 CAGCATGCGTGCCAGGTTCTCGGCGCGCTCCAGGTAACGCGACATCCAATACAGATCTGC 217 |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct 121 CAGCATGCGTGCCAGGTTCTCGGCGCGCTCCAGGTAGCGGGACATCCAATACAGATCTGC 180 Query 218 AGCTGTTCTACGCAGCATACTCAGCCCTCCACCACCCAGGTGTCCTTGGTTCCACCGCCT 277 ||| ||||||| || |||| ||||||||||||||||||||||||||||||||| |||||| Sbjct 181 AGCGGTTCTACTCAACATAGTCAGCCCTCCACCACCCAGGTGTCCTTGGTTCCGCCGCCT 240 Query 278 TGCGACGAGTTGACGACCAGCGAGCCTTCCTTCAGCGCCACGCGGGTCAAGCCACCGGGC 337 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 241 TGCGACGAGTTCACGACCAGCGAGCCTTCCTTCAGCGCCACGCGGGTCAAGCCGCCGGGC 300 Query 338 ACCAGGCG 345 |||||||| Sbjct 301 ACCAGGCG 308 >seq24926 Length=1690 Score = 351 bits (388), Expect = 2e-94 Identities = 308/381 (81%), Gaps = 6/381 (2%) Strand=Plus/Plus Query 6 GCAAAGAAGTGCAACATGCGTTCGGCATCCA--GGGTCTGGTGCCGCTCCAGGTAGCTGT 63 ||||| ||||||| || |||||| || | || ||| | || ||||| |||| || Sbjct 370 GCAAAAAAGTGCAGCAAGCGTTCAGCGTGCAATGGGCCA--TGGCGCTCGTGGTAATCGT 427 Query 64 CCAGGGTGCCGCTGCTGAGCAACGACATCGCCAGTTCATCCAGGCCATCGCTGCGCCCGG 123 |||| |||||| || | | || || ||| |||| ||| | ||||||||||| ||||||| Sbjct 428 CCAGAGTGCCGGTGATCAACAGCGGCATGGCCAATTCGTGCAGGCCATCGCCGCGCCCGT 487 Query 124 CCTGGGGCATCAAGGACAACGAATAACTGACTTCCAGCATGCGTGCCAGGTTCTCGGCGC 183 |||||||||||| |||| |||||| ||||| || ||||||||||| ||||| ||||| | Sbjct 488 CCTGGGGCATCAGCGACAGCGAATAGCTGACATCGAGCATGCGTGCGAGGTTTTCGGCAC 547 Query 184 GCTCCAGGTAACGCGACATCCAATACAGATCTGCAGCTGTTCTACGCAGCAT--ACTCAG 241 ||||||||||||| |||||||| |||| ||| | || ||||||| || ||| |||| Sbjct 548 GCTCCAGGTAACGTGACATCCAGTACAAATCCGAGGCAGTTCTACTCAACATGGCATCAG 607 Query 242 CCCTCCACCACCCAGGTGTCCTTGGTTCCACCGCCTTGCGACGAGTTGACGACCAGCGAG 301 |||| |||||||||||||| |||||||| ||||| || ||||||||||| ||||||||| Sbjct 608 TCCTCGACCACCCAGGTGTCTTTGGTTCCGCCGCCCTGGGACGAGTTGACCACCAGCGAG 667 Query 302 CCTTCCTTCAGCGCCACGCGGGTCAAGCCACCGGGCACCAGGCGGGTTTCCTTGCCCGAG 361 ||||| ||||||||| ||||||| |||||| ||||||| |||||| |||||||| || Sbjct 668 CCTTCGCGCAGCGCCACACGGGTCAGGCCACCCGGCACCACGCGGGTGTCCTTGCCGGAC 727 Query 362 AGCACGAAGGGTCGCAAGTCG 382 | ||||||||| |||| |||| Sbjct 728 AACACGAAGGGGCGCAGGTCG 748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1119656014400