Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= AAMG01002172.1
Length=233
Score E
Sequences producing significant alignments: (Bits) Value
seq20327 345 5e-93
seq24925 129 8e-28
seq26219 75.2 1e-11
>seq20327
Length=532
Score = 345 bits (382), Expect = 5e-93
Identities = 217/233 (93%), Gaps = 1/233 (0%)
Strand=Plus/Plus
Query 1 TCGAGTGGTCAAGCCGACCTTCGTGCGCCATGGCAAAACCTTGATCTAATCTATTTCCGG 60
||||||||||||||||||||||||||| |||||||||||| |||||||| | ||| ||||
Sbjct 57 TCGAGTGGTCAAGCCGACCTTCGTGCGTCATGGCAAAACCCTGATCTAACCAATT-CCGG 115
Query 61 CAGGCCAATGGCCGCTGACATTACTTCTTGAGGACACAGACTATGAGCGATATCCCTGCC 120
|||||||| ||||||||||||| | ||||||||||||||||||||||| |||||||||||
Sbjct 116 CAGGCCAAAGGCCGCTGACATTTCATCTTGAGGACACAGACTATGAGCAATATCCCTGCC 175
Query 121 GACCTGCGTTTTGCCGAAAGTCACGAATGGGCCCGTCTGGAAGCTGACGGCACCGTGACC 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 176 GACCTGCGTTTTGCCGAAAGTCACGAATGGGCCCGTCTGGAAGCTGACGGCACCGTGACC 235
Query 181 GTGGGTATCTCCGACCATGCCCAGGAAGCGTTGGGGGATGTGGTGATTGTCGA 233
|| || |||||||||||||| |||||||| ||||| ||||||||| |||| ||
Sbjct 236 GTCGGGATCTCCGACCATGCACAGGAAGCTTTGGGTGATGTGGTGTTTGTTGA 288
>seq24925
Length=1862
Score = 129 bits (142), Expect = 8e-28
Identities = 111/136 (82%), Gaps = 1/136 (1%)
Strand=Plus/Plus
Query 98 AGACTATGAGCGATATCCCTGCCGACCTGCGTTTTGCCGAAAGTCACGAATGGGCCCGTC 157
|||| |||||| ||||||| ||||| || |||||||||||||| || ||||||||||| |
Sbjct 30 AGAC-ATGAGCAATATCCCCGCCGAACTTCGTTTTGCCGAAAGCCATGAATGGGCCCGCC 88
Query 158 TGGAAGCTGACGGCACCGTGACCGTGGGTATCTCCGACCATGCCCAGGAAGCGTTGGGGG 217
||||| | ||||| ||||| || || || ||| |||||||| ||| ||||| |||| |
Sbjct 89 TGGAAACCGACGGTACCGTCACGGTAGGCATCAGTGACCATGCGCAGCAAGCGCTGGGTG 148
Query 218 ATGTGGTGATTGTCGA 233
| |||||| | |||||
Sbjct 149 ACGTGGTGTTCGTCGA 164
>seq26219
Length=11245
Score = 75.2 bits (82), Expect = 1e-11
Identities = 77/101 (76%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 125 TGCGTTTTGCCGAAAGTCACGAATGGGCCCGTCTGGAAGCTGACGGCACCGTGACCGTGG 184
||||||| |||| ||||||||| ||| | |||||||| |||| ||| ||||| |
Sbjct 7920 TGCGTTTCACCGACGACCACGAATGGCTGCGTGTAGAAGCTGATGGCAGCGTCACCGTAG 7861
Query 185 GTATCTCCGACCATGCCCAGGAAGCGTTGGGGGATGTGGTG 225
||||| | | | | |||||| | || ||||||||||||||
Sbjct 7860 GTATCACTGCCTACGCCCAGCATGCACTGGGGGATGTGGTG 7820
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 646207675194
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |