Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq15337 473 4e-131
seq4669 340 6e-91
seq21786 295 2e-77
seq30058 174 5e-41
seq15197 122 3e-25
seq3843 122 3e-25
seq17107 107 6e-21
seq7882 102 3e-19
seq23759 86.0 2e-14
>seq15337
Length=5198
Score = 473 bits (524), Expect = 4e-131
Identities = 283/297 (95%), Gaps = 0/297 (0%)
Strand=Plus/Plus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||||||||||||||||||| ||| ||||| | | ||||||||||||||||||
Sbjct 941 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAA 1000
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1001 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGG 1060
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1061 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATG 1120
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1121 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCA 1180
Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1181 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 1237
Score = 118 bits (130), Expect = 3e-24
Identities = 103/128 (80%), Gaps = 5/128 (4%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| || |||| ||||||| |||| |||| | |||||||||||||||||||
Sbjct 643 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACC 702
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||| |||| ||| ||||||||| ||||||||||||||| || |||| |||||| |
Sbjct 703 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTC-----CCCGGAGC 757
Query 127 GGCCCGCG 134
|| ||||
Sbjct 758 GGGTCGCG 765
>seq4669
Length=3610394
Score = 340 bits (376), Expect = 6e-91
Identities = 255/297 (86%), Gaps = 2/297 (1%)
Strand=Plus/Minus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
||||||||||||||||| ||||| || ||||| | | | ||||||||| |||||| |
Sbjct 50460 CTCCCACTTATTCTACATGTCTCAT-TCTCTTCACCATGCCAGACTAGAGTTAAGCTCTA 50402
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
||| |||||||||| || |||||||| ||||||| ||||||||||||| | |||| || |
Sbjct 50401 CAGAGTCTTCTTTCTCCTCTGATTCCACCAAGCCTGTTCCCTTGGCTGGGTTTTC-CTGG 50343
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||| ||| ||||||||||||||||||| || ||||||||||| | | |||||||||||||
Sbjct 50342 ATAATAGGTAGGGACAGTGGGAATCTCATTCATCCATTCATGTGTGCCACTAATTAGATG 50283
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476
| |||| |||||||||||| |||||||||| |||||||||| || ||||| | ||||
Sbjct 50282 AGGAGGTATTTGGCTACCTGAAGAGAGTCACAGTTACTCCCACCATTTACTCAAGCTTCA 50223
Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
|||||||||||||||||||||||||||||||| |||||||||||||| | |||||||
Sbjct 50222 TTGAATTTCTTCACTTTGACATTCAGAGCACTAGGCAGAAATCACATCGTGTCAACA 50166
Score = 77.0 bits (84), Expect = 1e-11
Identities = 81/107 (76%), Gaps = 5/107 (5%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| ||| || |||||||| |||| ||| |||||||| | |||| | | ||
Sbjct 50766 CTTGTGCTCCACAAGAAATTTCTGTCCTCCCTGAACTCCCCTTAGAAAACCTACCATTTG 50707
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
|||| ||| || |||||| ||||||||||||||| || ||||
Sbjct 50706 -----ACAGTTGTACCACCCCAGTCAAACTCCCCACCTGGCACTGTC 50665
>seq21786
Length=8727163
Score = 295 bits (326), Expect = 2e-77
Identities = 244/297 (82%), Gaps = 3/297 (1%)
Strand=Plus/Minus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
||||||||||| |||||||| |||| |||||| | | ||||||||| ||||||||
Sbjct 5438873 CTCCCACTTAT---ACACCTCTTGAGTCTTTTCACTGTGCCAGACTAGAGTGAAGCTCAA 5438817
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
||| || ||||||| |||||| ||||| || || ||||| ||||||||| ||| |
Sbjct 5438816 TGGGGACTCATTTCCCCAGTGATTCTGCCAAACCTCTTTCCTTGACTGTGGTTTTGCTGG 5438757
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||| ||||| ||||||||||||| || |||||||||||| ||| |||||||||||
Sbjct 5438756 ATAGTAGGTAGGGGCAGTGGGAATCTCATTCATCCATTCATGCATGTCCCTAATTAGATG 5438697
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476
|| | |||||||||||| ||||||||||| |||||||| || || |||||| | ||||
Sbjct 5438696 ACAAAGCATTTGGCTACTTTAAGAGAGTCTTAGTTACTTCCACCATTTACCAGAGCTTCA 5438637
Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
|||| || ||||||||||||||||| | |||| || |||||||||||||| | ||||
Sbjct 5438636 TTGATTTCCTTCACTTTGACATTCACAACACTAGGTAGAAATCACATTGCATTAACA 5438580
>seq30058
Length=441181
Score = 174 bits (192), Expect = 5e-41
Identities = 186/242 (77%), Gaps = 9/242 (4%)
Strand=Plus/Plus
Query 282 TAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCC-GCCAAGCCCGTTCCCTTG 340
|| ||||| | ||||||| | || ||| | |||| ||||| || | ||||||
Sbjct 220499 TACAGTCAGGTTCAACAG------CCTTGCCCACAGATTTTTGCCAAACCA-TCCCCTTG 220551
Query 341 GCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCG 400
||||| ||||| ||||| ||| || || ||| ||||| || || ||||||||||||
Sbjct 220552 GCTGTAGTTTCATCAGATAATAGGTAAAGAGAGTAGGAATATCATTCATCCATTCATGCA 220611
Query 401 CGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCC-GC 459
|| ||||||||||| ||||||| ||||||||||||||||||||||||||| ||| |
Sbjct 220612 TATCCCTAATTAGATGGTGAGGCATATGGCTACCTTAAGAGAGTCATAGTTACACCCATC 220671
Query 460 CGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATC 519
|||||| | || | ||||||||| || ||||||||||| ||| ||||||| |||||
Sbjct 220672 AATTTACCTGAGCCTCAGTGAATTTCTCCATTTTGACATTCAAAGCCCTGGGCAAAAATC 220731
Query 520 AC 521
||
Sbjct 220732 AC 220733
>seq15197
Length=4482504
Score = 122 bits (134), Expect = 3e-25
Identities = 178/249 (71%), Gaps = 17/249 (7%)
Strand=Plus/Minus
Query 284 GAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCC-TTGGC 342
|||||| ||| |||| |||| || || | |||||| | |||| | | ||| || ||
Sbjct 265224 GAGTCATGCTTAACATGGTCCTCCTTGTCAGCTGATCCTCTCAAGTCATTGCCCCTTAGC 265165
Query 343 TGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCG 402
||| |||| |||| | |||| |||||| | | | |||| | |
Sbjct 265164 TGTTGTTTGACTAGGTT------------AGTGAGAATCTTGGTCGTTAATTCGTACT-- 265119
Query 403 TCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGT 462
|| |||||||||||| |||||| || ||||||||||||| ||||||||||| | || ||
Sbjct 265118 TCTCTAATTAGATGATAAGGCATCTGACTACCTTAAGAGACTCATAGTTACT-CTGCTGT 265060
Query 463 TTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACA 522
||| || ||| ||||||||||| ||| ||||||| | | |||||||||||||||||
Sbjct 265059 TTATTTGC-CTTCATTGAATTTCTTTACTCTGACATTGAATGTACTGGGCAGAAATCACA 265001
Query 523 TTGCGTCAA 531
| | ||||
Sbjct 265000 TCACATCAA 264992
>seq3843
Length=452546
Score = 122 bits (134), Expect = 3e-25
Identities = 120/152 (79%), Gaps = 11/152 (7%)
Strand=Plus/Minus
Query 305 TCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 364
||||| || |||||||| ||||||| || ||||||| ||| |||| | |||| ||||
Sbjct 378528 TCTTTGCCTGCTGATTCTGCCAAGCTAATTGCCTTGGCAGTG-TTTCCATGGATACTAGA 378470
Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 424
||||||||||||| | || |||||| || |||||| |||||||| ||||||
Sbjct 378469 TAGGGACAGTGGGGGTT--GT------ATTCATAGGCATCACTATTTAGATGATGAGGCA 378418
Query 425 TTTGGCTACCTTAAGAGAGTCATAGTTACTCC 456
|||||||| |||| |||||||||||||||||
Sbjct 378417 TTTGGCTATCTTA--AGAGTCATAGTTACTCC 378388
>seq17107
Length=2850787
Score = 107 bits (118), Expect = 6e-21
Identities = 88/107 (82%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| || |||| ||||||| |||| ||| | |||||||| ||||||||||
Sbjct 671010 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCCGAGCTCGCCTTAGGAGACCTGCGTTACT 670951
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
|||| |||| ||| ||||||||| ||||||||||||||| || ||||
Sbjct 670950 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTC 670904
>seq7882
Length=1962508
Score = 102 bits (112), Expect = 3e-19
Identities = 68/76 (89%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 432 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACT 491
||||| |||||| |||||||||||| || ||||||| | |||| |||||||||||||||
Sbjct 1832230 ACCTTCAGAGAGGCATAGTTACTCCTGCTGTTTACCTGTGCTTCCTTGAATTTCTTCACT 1832171
Query 492 TTGACATTCAGAGCAC 507
||||||||||||||||
Sbjct 1832170 TTGACATTCAGAGCAC 1832155
>seq23759
Length=4713614
Score = 86.0 bits (94), Expect = 2e-14
Identities = 71/87 (82%), Gaps = 0/87 (0%)
Strand=Plus/Minus
Query 308 TTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAG 367
|||| | ||||||| ||||||| |||||||||||| ||||| | ||| ||||| |||
Sbjct 799608 TTCCTTGATGATTCCAGCAAGCCCAGTCCCTTGGCTGTAGTTTCTCCAGAGAGTAGGTAG 799549
Query 368 GGACAGTGGGAATCTCGTTAATCCATT 394
||| ||||| |||||| || |||||||
Sbjct 799548 GGAGAGTGGAAATCTCATTCATCCATT 799522
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1634697781024
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |