Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= AAMG01002205.1 Length=300 Score E Sequences producing significant alignments: (Bits) Value seq19161 479 5e-133 seq15201 194 3e-47 >seq19161 Length=2465 Score = 479 bits (530), Expect = 5e-133 Identities = 273/277 (99%), Gaps = 1/277 (0%) Strand=Plus/Plus Query 24 TTCGATCACGTCATGCAGCATCGCGGCCATCAGGCTCTGAAGGTCCATGTGCACGTCGGC 83 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct 1038 TTCGATCACGTCATGCAGCATCGCGGCCATCAGGCTCTGATGGTCCATGTGCATGTCGGC 1097 Query 84 AAGAATATTCGGCCACCGCAAGAGGATGGGTGACATACGCCTCGCCACTACGTCGGCGTT 143 ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1098 AAGAATATT-GGCCACCGCAAGAGGATGGGTGACATACGCCTCGCCGCTACGTCGGCGTT 1156 Query 144 GGCCGTCGTGGGCTTGTTCGGCGTAGAAATACGCTCGGCGAACCAGGTTGACCTGGTCTG 203 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1157 GGCCGTCGTGGGCTTGTTCGGCGTAGAAATACGCTCGGCGAACCAGGTTGACCTGGTCTG 1216 Query 204 CGCCGAGGTAGGCCGATAAGCGATCGGCGAGGGCGTCTATGCTCGGCAAAGTGTGAACTC 263 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1217 CGCCGAGGTAGGCCGATAAGCGATCGGCGAGGGCGTCTATGCTCGGCAAAGTGTGAACTC 1276 Query 264 CTGCCGATGGCTGTGACCCCGCGCCGTGCTACGTCGA 300 ||||||||||||||||||||||||||||||||||||| Sbjct 1277 CTGCCGATGGCTGTGACCCCGCGCCGTGCTACGTCGA 1313 >seq15201 Length=6699 Score = 194 bits (214), Expect = 3e-47 Identities = 192/247 (78%), Gaps = 1/247 (0%) Strand=Plus/Plus Query 24 TTCGATCACGTCATGCAGCATCGCGGCCATCAGGCTCTGAAGGTCCATGTGCACGTCGGC 83 ||||||||||||||| ||||| || ||||||||||| ||| |||||||||||| |||||| Sbjct 3324 TTCGATCACGTCATGGAGCATGGCCGCCATCAGGCTTTGATGGTCCATGTGCATGTCGGC 3383 Query 84 AAGAATATTCGGCCACCGCAAGAGGATGGGTGACATACGCCTCGCCACTACGTCGGCGTT 143 ||| || | |||||| || || || || || || || | ||| || || || || |||| Sbjct 3384 AAGGATGCT-GGCCACGGCCAGCGGGTGCGTCACGTAGGGCTCACCGCTGCGACGACGTT 3442 Query 144 GGCCGTCGTGGGCTTGTTCGGCGTAGAAATACGCTCGGCGAACCAGGTTGACCTGGTCTG 203 | || ||||| || |||||||||||||| || || || || |||||||||||||| || | Sbjct 3443 GCCCATCGTGCGCCTGTTCGGCGTAGAAGTAGGCGCGCCGTACCAGGTTGACCTGTTCGG 3502 Query 204 CGCCGAGGTAGGCCGATAAGCGATCGGCGAGGGCGTCTATGCTCGGCAAAGTGTGAACTC 263 ||| ||||| | ||| | || ||||| | ||| ||||| | ||||| | | ||| Sbjct 3503 GGCCTAGGTAAGTCGACAGCCGTTCGGCCAAGGCCTCTATACCCGGCATGGCTTAGCCTC 3562 Query 264 CTGCCGA 270 ||||||| Sbjct 3563 CTGCCGA 3569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 857336605312