Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq487 358 2e-96 >seq487 Length=3340 Score = 358 bits (396), Expect = 2e-96 Identities = 417/554 (75%), Gaps = 14/554 (3%) Strand=Plus/Minus Query 13 TCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCCAACCAGGCTGAG 72 ||| |||||||||| | ||| ||| || ||| || | ||| || ||| |||||| Sbjct 2706 TCTTGCAGTCAAGCACGCTTATGCCTTTGCACACAGTGCGCGATGTCCGACCGCGCTGAG 2647 Query 73 GGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAACTACCCA 132 | ||||| | || |||||||||| ||| ||||| | |||||||||| |||||||||| Sbjct 2646 CGTACCTTCGAGCTCCTCCGTTACTCTTTAGGAGGAGA-CCGCCCCAGTCAAACTACCCA 2588 Query 133 CCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATA-TCCACTACGGTCAGAG 191 ||| ||| |||||| | |||||| |||| || |||||||| || | ||| ||| | Sbjct 2587 CCATACACGGTCCCCGATCCAGATTATGGACCTAGGTTAGAACGTCAAGCACGA-CAGGG 2529 Query 192 TGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGTCTCCCACCTAT 251 ||||||||||| | | |||||| || |||||| | |||||| ||||||||||| Sbjct 2528 TGGTATTTCAAGGATGGCTCCACCACAGCTAGCGCCATGGTTTCATAGCCTCCCACCTAT 2469 Query 252 CCTACACAAACCGCACCGAATGC-CAATACCAAGCTATAGTGAAGGTCC-CGGGGTCTTT 309 |||||||| || | || || | || | |||||||||| ||||| | |||||||||| Sbjct 2468 CCTACACAGAC-GAACTCAACGTTCAGTGTAAAGCTATAGTAAAGGTTCACGGGGTCTTT 2410 Query 310 TCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGT 369 |||| |||| || ||| ||||||| || | | ||||||||| | | || ||| Sbjct 2409 CCGTCTTGCCACGGGAACGCTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGT 2350 Query 370 TGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAAT 429 |||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2349 GGAGACAGCGCCGCTGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAAT 2290 Query 430 TTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATTACCCGC 489 ||||||||||||||| ||||||||||| |||||||||||||||||||| || | || Sbjct 2289 TTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCGATCAAGAGC 2230 Query 490 CTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTC 549 || | | || ||| || | ||||||||||||||||||||||||||| Sbjct 2229 TTCGC------CTTG--CGGCTGACCCCATCAATTAACCTTCCAGCACCGGGCAGGCGTC 2178 Query 550 AGTCCGTATACCTC 563 | || ||||| || Sbjct 2177 ACACCCTATACGTC 2164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1701877141888