Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq15337 104 4e-20
seq10265 86.0 1e-14
seq29157 82.4 1e-13
seq29687 75.2 2e-11
>seq15337
Length=5198
Score = 104 bits (114), Expect = 4e-20
Identities = 93/114 (82%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | ||||| | || | || |||| || || |
Sbjct 318 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCAAT 261
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 260 GGGGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 207
>seq10265
Length=4946239
Score = 86.0 bits (94), Expect = 1e-14
Identities = 76/94 (81%), Gaps = 1/94 (1%)
Strand=Plus/Minus
Query 21 TTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGC 80
|||||| | ||||| | || | || |||| || ||||| |||||||||||| |||
Sbjct 1232563 TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAAGAGCCAGTGGGGCGAAGCTACCACCTGT 1232505
Query 81 TGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
|||||||| ||||||||||||||||||||||||
Sbjct 1232504 GGGATTATGACTGAACGCCTCTAAGTCAGAATCC 1232471
>seq29157
Length=6873498
Score = 82.4 bits (90), Expect = 1e-13
Identities = 60/70 (86%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 45 TGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAA 104
|| |||| || || || |||||||||||||||| |||||||| ||||||||||||||
Sbjct 3791022 TGGCTGAGGAGCCAATGGGGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAA 3791081
Query 105 GTCAGAATCC 114
||||||||||
Sbjct 3791082 GTCAGAATCC 3791091
>seq29687
Length=3267126
Score = 75.2 bits (82), Expect = 2e-11
Identities = 67/84 (80%), Gaps = 0/84 (0%)
Strand=Plus/Minus
Query 31 TTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGG 90
||||| | || | || |||| || || || |||||||||| |||| ||||||||
Sbjct 96686 TTGGTGTATGTGCTTGGCTGAGGAGCCAATGGGGCGAAGCTACTATCTATGGGATTATGA 96627
Query 91 CTGAACGCCTCTAAGTCAGAATCC 114
||||||||||||||||||||||||
Sbjct 96626 CTGAACGCCTCTAAGTCAGAATCC 96603
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 818956261632
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |