Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_009552.2 Length=40863 Score E Sequences producing significant alignments: (Bits) Value seq17400 82.4 2e-11 >seq17400 Length=8471 Score = 82.4 bits (90), Expect = 2e-11 Identities = 165/245 (67%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 37658 CAATATTTAGACTTGCTGCAAGACATCTTAGAAAACGGCGTCGAAAAAGAAGACCGAACG 37717 |||||| ||||| | | ||| | ||| | ||| | || | || |||| || || || Sbjct 4755 CAATATCTAGACCTTTTACAACATATCCTTGAACATGGTGGTGATAAAGGTGATCGTACC 4696 Query 37718 GGCGTCGGCACGCTGTCGGTGTTCGGCCGCCAGCTCCGCTTCAACTTACAAGATGGATTT 37777 || || || | || || || || | ||| | ||||| || | | || ||| Sbjct 4695 GGAACAGGTACTCGTTCTGTATTTGGTCATCAGATGCGCTTTGACCTCTCTAAAGGCTTT 4636 Query 37778 CCGCTCGTGACAACGAAAAAATTGCATATCCGCTCCATCATTTATGAACTGCTTTGGTTT 37837 || || | || || ||||| | ||| | ||||| ||| | ||||||| | |||||| Sbjct 4635 CCACTTTTAACCACAAAAAAGGTCCATTTTCGCTCTATCGTCGTTGAACTGTTATGGTTT 4576 Query 37838 TTAAAAGGCGATACGAACGTCCGCTATTTGCAGGAGAATGGCGTGACGATTTGGGATGAG 37897 |||||||||||||| || || ||||| ||||| || || || || |||||||| Sbjct 4575 TTAAAAGGCGATACCAATGTGAAATATTTACAGGATAACAAAGTAACAATCTGGGATGAA 4516 Query 37898 TGGGC 37902 ||||| Sbjct 4515 TGGGC 4511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130592353387450