Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq23530 114 1e-20
seq20974 95.1 1e-14
seq15277 82.4 6e-11
>seq23530
Length=2024980
Score = 114 bits (126), Expect = 1e-20
Identities = 202/290 (70%), Gaps = 6/290 (2%)
Strand=Plus/Minus
Query 61084 GATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGAT 61143
||| |||||| |||| | || ||||| |||||||||||||| | |||||||| ||
Sbjct 955011 GATGTTTGGCAGGTGTATAGGAAAGCGGAGGCTTCCTTCTGGACAGCTGAGGAGGTGGAC 954952
Query 61144 TTGTCCAAAGACATGAATGACTGGGAG--CGTTTATCGAGCGGTGAACAACATTTCATTA 61201
| ||||| ||||| | ||||||| | | | | | || || | |||||| |
Sbjct 954951 CTTTCCAAGGACATTCAGCACTGGGAAGCCCTGAAGCCTGAGGAGAG--ATATTTCACTT 954894
Query 61202 AACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAAC 61261
|| ||| |||| |||| ||| || || || || || ||||| || || |||| |
Sbjct 954893 CACGTGTTCTGGCTTTCTCTGCAGCAAGTGATGGCATAGTAAATGAAAACTTGGTGGAGC 954834
Query 61262 GT-TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCC 61320
| || || || || || || | |||| || |||| ||||| |||||||| ||||||
Sbjct 954833 GGCTTAGC-CAAGAAGTTCAGATTACGGAAGCCCGTTACTTCTATGGCTTCCAAATTGCC 954775
Query 61321 ATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACAT 61370
||||| || | || || || ||||||||| | |||| || || |||||
Sbjct 954774 ATGGAAAACATACATTCTGAAATGTACAGTCTCCTCACTGACACTTACAT 954725
>seq20974
Length=1049469
Score = 95.1 bits (104), Expect = 1e-14
Identities = 85/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329
||||||||||| || | ||||| || |||||||| ||||| || ||| ||| || |||
Sbjct 254538 CAGGAGGTGCAGGTTCCAGAGGCTCGCTGTTTCTATGGCTTTCAAATTCTCATCGAAAAT 254479
Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376
|| ||||| |||||||||||| | || || || || |||||||| ||
Sbjct 254478 GTTCACTCAGAGATGTACAGTTTGCTAATAGACACTTACATCAGAGA 254432
>seq15277
Length=4737824
Score = 82.4 bits (90), Expect = 6e-11
Identities = 69/85 (81%), Gaps = 0/85 (0%)
Strand=Plus/Minus
Query 61286 CGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGT 61345
|||| || ||||||||||| |||||||| |||||||||||||| | || || || ||||
Sbjct 3369467 CGGAAGCCCGTTGTTTCTATGGCTTCCAAATTGCCATGGAGAACATACATTCTGAAATGT 3369408
Query 61346 ACAGTGTTCTCATCGATACGTACAT 61370
| ||| | ||||| || || |||||
Sbjct 3369407 ATAGTCTCCTCATTGACACTTACAT 3369383
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397419184458320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |