Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_031264.1 Length=46877 Score E Sequences producing significant alignments: (Bits) Value seq3336 131 5e-26 >seq3336 Length=1417 Score = 131 bits (144), Expect = 5e-26 Identities = 188/263 (71%), Gaps = 4/263 (2%) Strand=Plus/Minus Query 3631 GATTACTGGTCTGGAGGTGGCGTTACGTCGAAACGGGTTGCAGCG--GCGCTTCGGGCTA 3688 |||| ||| | || | ||||| || | || ||| | ||||| |||||||| ||| Sbjct 454 GATTGGTGGACGGGTGAGGGCGTAACTGCAAAGCGGAT--CAGCGCTGCGCTTCGATCTA 397 Query 3689 TCGGCAACAATGAAATCTTTGTCGATATCAACTCTCCGGGCGGGGACTTCTTTGAAGGTG 3748 |||| ||| ||| | || | |||||| || ||||| ||| | |||||||| Sbjct 396 TCGGTGACAGTGATGTGACCGTGAAGATCAACAGCCCAGGCGGCGACGTGTTTGAAGGGC 337 Query 3749 TGGCGATCTACAATCTGCTGCGCGCGCACCCGGCGAAAGTCACAGTGCGCATTCTCGGCA 3808 |||| |||||||| |||||||||| |||| || ||||| || |||| || |||||| Sbjct 336 TGGCCATCTACAACCTGCTGCGCGAGCACAAGGGCAAAGTGACGGTGCAAATCCTCGGCC 277 Query 3809 TGGCCGCTTCTGCCGCATCTGTTATCGCTATGGCCGGTGATGAAGTCCTGATCGGCAAGG 3868 | ||||| || ||||| || | ||||||||||| | ||||||| ||| ||||| | Sbjct 276 TCGCCGCCTCGGCCGCGTCGTTCATCGCTATGGCGGCTGATGAAATCCAGATCGCGCGCG 217 Query 3869 CAGGCTTCATTATGGTGCACAAC 3891 | ||||| | ||| | |||||| Sbjct 216 CCGGCTTTCTGATGATTCACAAC 194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149830134484134